[][] ath   AT3G56970 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
GO BP
GO:0010106 [list] [network] cellular response to iron ion starvation  (6 genes)  IEP  
GO:0055072 [list] [network] iron ion homeostasis  (96 genes)  IGI  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription factor complex  (80 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding  (152 genes)  IBA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IBA  
GO:0046983 [list] [network] protein dimerization activity  (570 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_191256.1 
BLAST NP_191256.1 
Orthologous [Ortholog page] BHLH100 (ath)bHLH39 (ath)LOC4325750 (osa)LOC7495693 (ppo)LOC11433801 (mtr)LOC25483183 (mtr)LOC25483186 (mtr)LOC100247143 (vvi)LOC100252974 (vvi)LOC100262373 (vvi)BHLH300 (gma)BHLH320 (gma)LOC101257620 (sly)LOC101258211 (sly)BHLH322 (gma)LOC103636279 (zma)LOC103650720 (zma)LOC103828716 (bra)LOC103828717 (bra)LOC103830080 (bra)LOC103831386 (bra)LOC103841601 (bra)LOC103841602 (bra)LOC103848954 (bra)LOC103863069 (bra)LOC103863074 (bra)LOC103863075 (bra)LOC103863077 (bra)LOC103865869 (bra)LOC103866544 (bra)LOC104644426 (sly)
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  chlo_mito 1  (predict for NP_191256.1)
Subcellular
localization
TargetP
other 7  (predict for NP_191256.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with bHLH38 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
22.1 bHLH39 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 824865
17.6 BHLH100 basic helix-loop-helix protein 100 [detail] 818723
12.2 AT1G47395 hypothetical protein [detail] 841143
Coexpressed
gene list
[Coexpressed gene list for bHLH38]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824864    
Refseq ID (protein) NP_191256.1 


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