[←][→] ath   AT3G56990 Gene
functional annotation
Function   embryo sac development arrest 7  
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IBA  
GO:0009561 [list] [network] megagametogenesis  (72 genes)  IMP  
GO CC
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001327449.1  NP_001327450.1  NP_191258.2 
BLAST NP_001327449.1  NP_001327450.1  NP_191258.2 
Orthologous [Ortholog page] LOC4339985 (osa)  LOC7464103 (ppo)  LOC11405313 (mtr)  LOC100257259 (vvi)  LOC100285973 (zma)  LOC100381920 (zma)  LOC100813898 (gma)  LOC100817392 (gma)  LOC101246880 (sly)  LOC103637924 (zma)  LOC103830081 (bra)  LOC103841603 (bra) 
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for NP_001327449.1)
chlo 6,  cyto 1,  nucl 1,  mito 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001327450.1)
chlo 9  (predict for NP_191258.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001327449.1)
other 4,  mito 3  (predict for NP_001327450.1)
other 4,  mito 3  (predict for NP_191258.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with EDA7 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT2G40700 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 818665
9.3 AT1G63810 nucleolar protein [detail] 842684
9.1 AT4G25730 FtsJ-like methyltransferase family protein [detail] 828678
5.8 AT4G38380 MATE efflux family protein [detail] 829995
3.8 AT1G24265 bZIP transcription factor, putative (DUF1664) [detail] 839041
Coexpressed
gene list		 [Coexpressed gene list for EDA7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251678_at
251678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251678_at
251678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251678_at
251678_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824866      
Refseq ID (protein) NP_001327449.1 
NP_001327450.1 
NP_191258.2 


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