[←][→] ath   AT3G61420 Gene
functional annotation
Function   BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)  
GO BP
GO:0006360 [list] [network] transcription by RNA polymerase I  (9 genes)  IBA  
GO:0070816 [list] [network] phosphorylation of RNA polymerase II C-terminal domain  (15 genes)  IBA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IEA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  IBA  
GO CC
GO:0000439 [list] [network] transcription factor TFIIH core complex  (8 genes)  IBA  
GO:0005675 [list] [network] transcription factor TFIIH holo complex  (15 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (26 genes)  IBA  
GO:0008094 [list] [network] DNA-dependent ATPase activity  (82 genes)  IBA  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
Protein NP_001326379.1  NP_191701.4 
BLAST NP_001326379.1  NP_191701.4 
Orthologous [Ortholog page] AT1G55750 (ath)  LOC4345313 (osa)  LOC7466730 (ppo)  LOC11406928 (mtr)  LOC25496637 (mtr)  LOC100193949 (zma)  LOC100249755 (vvi)  LOC100776016 (gma)  LOC100811780 (gma)  LOC101251518 (sly)  LOC103852565 (bra) 
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for NP_001326379.1)
cyto 6,  cysk 1,  mito 1,  pero 1,  golg 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_191701.4)
Subcellular
localization
TargetP
other 8  (predict for NP_001326379.1)
other 6,  scret 5  (predict for NP_191701.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G61420 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 AT2G37840 Protein kinase superfamily protein [detail] 818361
4.8 AT4G34140 D111/G-patch domain-containing protein [detail] 829562
4.8 AT5G04090 histidine-tRNA ligase [detail] 830288
4.3 AT5G03180 RING/U-box superfamily protein [detail] 831897
Coexpressed
gene list		 [Coexpressed gene list for AT3G61420]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 825315      
Refseq ID (protein) NP_001326379.1 
NP_191701.4 


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