[←][→] ath   AT3G61620 Gene
functional annotation
Function   3'-5'-exoribonuclease family protein  
GO BP
GO:0071051 [list] [network] polyadenylation-dependent snoRNA 3'-end processing  (7 genes)  IBA  
GO:0034475 [list] [network] U4 snRNA 3'-end processing  (10 genes)  IBA  
GO:0034427 [list] [network] nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'  (12 genes)  IBA  
GO:0071028 [list] [network] nuclear mRNA surveillance  (14 genes)  IBA  
GO:0016075 [list] [network] rRNA catabolic process  (17 genes)  IBA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (12 genes)  IBA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (13 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001118878.1  NP_191721.1 
BLAST NP_001118878.1  NP_191721.1 
Orthologous [Ortholog page] LOC4346519 (osa)  LOC7492754 (ppo)  LOC11431768 (mtr)  LOC100192964 (zma)  LOC100265488 (vvi)  LOC100782953 (gma)  LOC100818324 (gma)  LOC101250449 (sly)  LOC103830312 (bra)  LOC103841986 (bra) 
Subcellular
localization
wolf
cyto 5,  pero 2,  chlo 1,  nucl 1  (predict for NP_001118878.1)
cyto 5,  pero 2,  chlo 1,  nucl 1  (predict for NP_191721.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001118878.1)
other 8,  mito 3  (predict for NP_191721.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03018 RNA degradation 2
Genes directly connected with RRP41 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 AT1G60080 3'-5'-exoribonuclease family protein [detail] 842303
7.9 RDM1 RNA-DIRECTED DNA METHYLATION 1 [detail] 821839
7.9 AT1G15420 WD repeat protein [detail] 838113
6.3 AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily protein [detail] 829746
5.5 AT4G31930 Mitochondrial glycoprotein family protein [detail] 829323
Coexpressed
gene list		 [Coexpressed gene list for RRP41]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251288_at
251288_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251288_at
251288_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251288_at
251288_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825335      
Refseq ID (protein) NP_001118878.1 
NP_191721.1 


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