[←][→] ath   AT3G61860 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (30 genes)  IBA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (38 genes)  IBA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IDA  
GO:0008380 [list] [network] RNA splicing  (272 genes)  NAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IBA IDA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_567120.1 
BLAST NP_567120.1 
Orthologous [Ortholog page] LOC542174 (zma)  LOC542693 (zma)  RS31a (ath)  LOC4334964 (osa)  LOC7492794 (ppo)  LOC7497271 (ppo)  LOC11445062 (mtr)  LOC100192821 (zma)  LOC100255266 (vvi)  LOC100797709 (gma)  LOC100801043 (gma)  LOC101258786 (sly)  LOC101266564 (sly)  LOC103866451 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_567120.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_567120.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
Genes directly connected with RS31 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 829732
7.1 AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 842382
7.1 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
6.8 AT3G59470 Far-red impaired responsive (FAR1) family protein [detail] 825116
6.8 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836731
6.2 RS31a RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819273
6.1 CNX5 co-factor for nitrate, reductase and xanthine dehydrogenase 5 [detail] 835604
5.9 ERCC1 nucleotide repair protein [detail] 819685
Coexpressed
gene list		 [Coexpressed gene list for RS31]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251242_at
251242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251242_at
251242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251242_at
251242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825359      
Refseq ID (protein) NP_567120.1 


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