[←][→] ath   AT4G28830 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein  
GO BP
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (340 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG
Protein NP_001078464.1  NP_001328315.1  NP_001328316.1  NP_194612.2 
BLAST NP_001078464.1  NP_001328315.1  NP_001328316.1  NP_194612.2 
Orthologous [Ortholog page] LOC4340217 (osa)  LOC7488926 (ppo)  LOC11425160 (mtr)  LOC100191332 (zma)  LOC100264490 (vvi)  LOC100305753 (gma)  LOC101253662 (sly)  LOC103854070 (bra)  LOC103861855 (bra) 
Subcellular
localization
wolf
cyto 4,  mito 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_001078464.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001328315.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001328316.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_194612.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001078464.1)
other 6  (predict for NP_001328315.1)
other 6  (predict for NP_001328316.1)
other 6  (predict for NP_194612.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G28830 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 AT1G70150 zinc ion binding protein [detail] 843351
7.1 La2 RNA recognition motif (RRM)-containing protein [detail] 844327
6.8 DRM2 domains rearranged methyltransferase 2 [detail] 831315
6.4 AT5G63200 tetratricopeptide repeat (TPR)-containing protein [detail] 836441
6.3 APEM9 3-phosphoinositide-dependent protein kinase-1 [detail] 820223
6.1 AT3G59490 hypothetical protein [detail] 825118
6.0 ORG4 OBP3-responsive protein 4 (ORG4) [detail] 815155
5.7 AT3G47630 translocator assembly/maintenance protein [detail] 823917
5.6 AT2G41945 transmembrane protein [detail] 2745591
5.6 AT1G13380 sodium/hydrogen exchanger (DUF1218) [detail] 837898
5.1 AT4G14520 DNA-directed RNA polymerase II-like protein [detail] 827099
4.8 AT3G03010 Peptidyl-tRNA hydrolase II (PTH2) family protein [detail] 821157
Coexpressed
gene list		 [Coexpressed gene list for AT4G28830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253762_at
253762_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253762_at
253762_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253762_at
253762_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829004      
Refseq ID (protein) NP_001078464.1 
NP_001328315.1 
NP_001328316.1 
NP_194612.2 


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