[←][→] ath   AT4G28840 Gene
functional annotation
Function   mediator of RNA polymerase II transcription subunit  
GO BP
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001329538.1  NP_001329539.1  NP_194613.4 
BLAST NP_001329538.1  NP_001329539.1  NP_194613.4 
Orthologous [Ortholog page] AT2G20080 (ath)  LOC4325520 (osa)  LOC11406019 (mtr)  LOC11442625 (mtr)  LOC100268083 (vvi)  LOC100527788 (gma)  LOC100779060 (gma)  LOC100801080 (gma)  LOC100804813 (gma)  LOC101253755 (sly)  LOC103635319 (zma)  LOC103636172 (zma)  LOC103651359 (zma)  LOC103837993 (bra)  LOC103842613 (bra)  LOC103854061 (bra)  LOC103861856 (bra)  LOC104648205 (sly)  LOC107278054 (osa)  LOC108870409 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001329538.1)
nucl 9,  cyto_nucl 5  (predict for NP_001329539.1)
nucl 9,  cyto_nucl 5  (predict for NP_194613.4)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001329538.1)
chlo 8  (predict for NP_001329539.1)
chlo 8  (predict for NP_194613.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G28840 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 CYP82F1 cytochrome P450, family 82, subfamily F, polypeptide 1 [detail] 817054
6.4 AT2G20080 hypothetical protein [detail] 816527
3.9 CYP705A5 cytochrome P450, family 705, subfamily A, polypeptide 5 [detail] 834850
Coexpressed
gene list		 [Coexpressed gene list for AT4G28840]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 829005      
Refseq ID (protein) NP_001329538.1 
NP_001329539.1 
NP_194613.4 


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