[←][→] ath   AT4G29830 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0010452 [list] [network] histone H3-K36 methylation  (4 genes)  IMP  
GO:1904278 [list] [network] positive regulation of wax biosynthetic process  (7 genes)  IGI  
GO:0051568 [list] [network] histone H3-K4 methylation  (10 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IGI IMP  
GO:0016441 [list] [network] posttranscriptional gene silencing  (138 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO CC
GO:0016593 [list] [network] Cdc73/Paf1 complex  (7 genes)  IDA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IPI  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_194712.1 
BLAST NP_194712.1 
Orthologous [Ortholog page] LOC4351059 (osa)  LOC7484647 (ppo)  LOC25494198 (mtr)  LOC100192788 (zma)  LOC100257752 (vvi)  LOC100790793 (gma)  LOC100791764 (gma)  LOC101246693 (sly)  LOC101260155 (sly)  LOC103853257 (bra) 
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_pero 3  (predict for NP_194712.1)
Subcellular
localization
TargetP
other 7  (predict for NP_194712.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
ath03018 RNA degradation 2
Genes directly connected with VIP3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 CSN5A COP9 signalosome 5A [detail] 838899
6.0 GTF2H2 general transcription factor II H2 [detail] 839332
6.0 AT1G67250 Proteasome maturation factor UMP1 [detail] 843045
Coexpressed
gene list		 [Coexpressed gene list for VIP3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253645_at
253645_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253645_at
253645_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253645_at
253645_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829105      
Refseq ID (protein) NP_194712.1 


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