ATTED-II : GeneID search result

[←][→] ath AT4G32420 Gene

functional annotation

Function

Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

GO BP

GO:0000413 [list] [network] protein peptidyl-prolyl isomerization	(32 genes)	IEA
GO:0042026 [list] [network] protein refolding	(45 genes)	IBA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IEA ISM

GO MF

GO:0016018 [list] [network] cyclosporin A binding	(15 genes)	IBA
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity	(54 genes)	IBA
GO:0051082 [list] [network] unfolded protein binding	(125 genes)	IBA

KEGG

Protein

NP_001119097.1 NP_001190888.1 NP_001190889.1 NP_001329498.1 NP_001329499.1 NP_194968.2

BLAST

NP_001119097.1 NP_001190888.1 NP_001190889.1 NP_001329498.1 NP_001329499.1 NP_194968.2

Orthologous

[Ortholog page] ROC3 (ath) AT2G21130 (ath) ROC2 (ath) ROC5 (ath) ROC1 (ath) LOC4328121 (osa) LOC4342020 (osa) LOC4342555 (osa) LOC4347920 (osa) LOC4348134 (osa) LOC7472146 (ppo) LOC7477866 (ppo) LOC7490647 (ppo) LOC7493977 (ppo) LOC11422523 (mtr) LOC11431333 (mtr) LOC11444406 (mtr) LOC100247119 (vvi) LOC100261571 (vvi) LOC100267506 (vvi) LOC100274576 (zma) LOC100282750 (zma) LOC100283115 (zma) CYP11 (gma) LOC100384625 (zma) CYP3 (gma) CyP (sly) CYP1 (gma) CYP4 (gma) CYP7 (gma) LOC101251734 (sly) LOC101254541 (sly) LOC103627222 (zma) LOC103653580 (zma) LOC103828088 (bra) LOC103833770 (bra) ROC2 (bra) LOC103837773 (bra) LOC103841514 (bra) LOC103850950 (bra) CYP2 (gma) LOC109939964 (zma)

Subcellular
localization
wolf

nucl 9	(predict for NP_001119097.1)
nucl 10	(predict for NP_001190888.1)
nucl 10	(predict for NP_001190889.1)
nucl 10	(predict for NP_001329498.1)
nucl 10	(predict for NP_001329499.1)
nucl 10	(predict for NP_194968.2)

Subcellular
localization
TargetP

other 9	(predict for NP_001119097.1)
other 8	(predict for NP_001190888.1)
other 8	(predict for NP_001190889.1)
other 8	(predict for NP_001329498.1)
other 8	(predict for NP_001329499.1)
other 8	(predict for NP_194968.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	RNA transport	2

Genes directly connected with AT4G32420 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.3	RFC1	replication factor C1	[detail]	832261
7.7	NIH	nuclear DEIH-boxhelicase	[detail]	837177
7.4	ARP5	actin-related protein 5	[detail]	820416

Coexpressed
gene list

[Coexpressed gene list for AT4G32420]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253429_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253429_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253429_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829377
Refseq ID (protein)	NP_001119097.1
	NP_001190888.1
	NP_001190889.1
	NP_001329498.1
	NP_001329499.1
	NP_194968.2

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