ATTED-II : GeneID search result

[←][→] ath AT4G32430 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:1905639 [list] [network] positive regulation of mitochondrial mRNA catabolic process	(1 genes)	IMP
GO:0009451 [list] [network] RNA modification	(403 genes)	IBA

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

IDA ISM

GO MF

KEGG

Protein

NP_001328428.1 NP_194969.2

BLAST

NP_001328428.1 NP_194969.2

Orthologous

[Ortholog page] LOC4344238 (osa) LOC7484605 (ppo) LOC11439884 (mtr) LOC100256028 (vvi) LOC101257644 (sly) LOC102660550 (gma) LOC103633546 (zma) LOC103850943 (bra)

Subcellular
localization
wolf

chlo 6, chlo_mito 4, vacu 1, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_plas 1	(predict for NP_001328428.1)
nucl 3, chlo_mito 3, chlo 2, mito 2, cyto_nucl 2	(predict for NP_194969.2)

Subcellular
localization
TargetP

mito 8, other 4	(predict for NP_001328428.1)
mito 8	(predict for NP_194969.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G32430 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.6	AT3G02330	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	821115
8.6	SLO2	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	815845
8.3	AT1G20230	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	838612
6.0	AT1G50270	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	841449

Coexpressed
gene list

[Coexpressed gene list for AT4G32430]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253430_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253430_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253430_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829378
Refseq ID (protein)	NP_001328428.1
Refseq ID (protein)	NP_194969.2

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