[←][→] ath   AT5G04250 Gene
functional annotation
Function   Cysteine proteinases superfamily protein  
GO BP
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA  
GO:0006508 [list] [network] proteolysis  (901 genes)  ISS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
KEGG
Protein NP_001119168.1  NP_568136.1 
BLAST NP_001119168.1  NP_568136.1 
Orthologous [Ortholog page] LOC4331162 (osa)  LOC4334861 (osa)  LOC7479866 (ppo)  LOC11418392 (mtr)  LOC11429553 (mtr)  LOC100243216 (vvi)  LOC100254784 (vvi)  LOC100255072 (vvi)  LOC100279737 (zma)  LOC100282393 (zma)  LOC100791075 (gma)  LOC100811064 (gma)  LOC100811851 (gma)  LOC100814098 (gma)  LOC100820379 (gma)  LOC101253373 (sly)  LOC101267197 (sly)  LOC101267440 (sly)  LOC103847315 (bra)  LOC103855560 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001119168.1)
nucl 7,  cyto 2  (predict for NP_568136.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001119168.1)
other 9  (predict for NP_568136.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
ath04712 Circadian rhythm - plant 2
Genes directly connected with AT5G04250 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 AT5G17850 Sodium/calcium exchanger family protein [detail] 831653
4.8 AT1G73920 alpha/beta-Hydrolases superfamily protein [detail] 843729
4.5 DREB2B DRE/CRT-binding protein 2B [detail] 820273
Coexpressed
gene list		 [Coexpressed gene list for AT5G04250]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245699_at
245699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245699_at
245699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245699_at
245699_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830304      
Refseq ID (protein) NP_001119168.1 
NP_568136.1 


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