[←][→] ath   AT5G05550 Gene
functional annotation
Function   sequence-specific DNA binding transcription factor  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_001332681.1  NP_568158.1  NP_850774.1 
BLAST NP_001332681.1  NP_568158.1  NP_850774.1 
Orthologous [Ortholog page] AT3G11100 (ath)  AT3G58630 (ath)  LOC4325908 (osa)  LOC4339599 (osa)  LOC7462084 (ppo)  LOC7490318 (ppo)  LOC11417768 (mtr)  LOC25485964 (mtr)  LOC100251820 (vvi)  LOC100253914 (vvi)  LOC100260025 (vvi)  LOC100260870 (vvi)  LOC100272931 (zma)  LOC100282650 (zma)  LOC100784918 (gma)  LOC100785349 (gma)  LOC100811154 (gma)  LOC100815241 (gma)  LOC101055599 (sly)  LOC101246435 (sly)  LOC101247539 (sly)  LOC101252652 (sly)  LOC103651369 (zma)  LOC103830171 (bra)  LOC103841738 (bra)  LOC103846902 (bra)  LOC103847088 (bra)  LOC103870374 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001332681.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_568158.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_850774.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332681.1)
other 7  (predict for NP_568158.1)
other 7  (predict for NP_850774.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G05550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT3G11100 sequence-specific DNA binding transcription factor [detail] 820281
6.0 ORG4 OBP3-responsive protein 4 (ORG4) [detail] 815155
5.7 AT4G31270 sequence-specific DNA binding transcription factor [detail] 829254
4.9 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 837604
4.7 AT1G17640 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 838341
Coexpressed
gene list		 [Coexpressed gene list for AT5G05550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250766_at
250766_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250766_at
250766_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250766_at
250766_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830438      
Refseq ID (protein) NP_001332681.1 
NP_568158.1 
NP_850774.1 


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