[←][→] ath   AT5G07350 Gene
functional annotation
Function   TUDOR-SN protein 1  
GO BP
GO:0010372 [list] [network] positive regulation of gibberellin biosynthetic process  (3 genes)  IMP  
GO:0009306 [list] [network] protein secretion  (16 genes)  IGI  
GO:0034605 [list] [network] cellular response to heat  (67 genes)  IDA  
GO:0006402 [list] [network] mRNA catabolic process  (80 genes)  IGI IMP  
GO:0006401 [list] [network] RNA catabolic process  (97 genes)  IBA  
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP IGI IMP  
GO CC
GO:0016442 [list] [network] RISC complex  (3 genes)  IEA  
GO:0010494 [list] [network] cytoplasmic stress granule  (20 genes)  IDA  
GO:0048471 [list] [network] perinuclear region of cytoplasm  (23 genes)  IEA  
GO:0000932 [list] [network] P-body  (56 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IBA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA IDA TAS  
KEGG
Protein NP_001154697.2  NP_196352.2 
BLAST NP_001154697.2  NP_196352.2 
Orthologous [Ortholog page] Tudor2 (ath)  LOC4329508 (osa)  LOC7456667 (ppo)  LOC11434089 (mtr)  LOC100244222 (vvi)  LOC100256648 (vvi)  LOC100280237 (zma)  LOC100782692 (gma)  LOC100794481 (gma)  LOC100802766 (gma)  LOC100809534 (gma)  LOC101247006 (sly)  LOC101247307 (sly)  LOC103627215 (zma)  LOC103850652 (bra)  LOC103854960 (bra)  LOC103855724 (bra)  LOC103873470 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for NP_001154697.2)
chlo 6,  cyto 4  (predict for NP_196352.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001154697.2)
mito 4,  other 3  (predict for NP_196352.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03060 Protein export 2
Genes directly connected with Tudor1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.9 Tudor2 TUDOR-SN protein 2 [detail] 836300
11.2 AT1G70770 transmembrane protein (Protein of unknown function DUF2359, transmembrane) [detail] 843414
8.9 AT2G21390 Coatomer, alpha subunit [detail] 816678
7.8 AT5G61970 signal recognition particle-related / SRP-like protein [detail] 836318
6.5 ACS acetyl-CoA synthetase [detail] 833655
5.4 NUDT3 nudix hydrolase homolog 3 [detail] 844308
Coexpressed
gene list		 [Coexpressed gene list for Tudor1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250626_at
250626_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250626_at
250626_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250626_at
250626_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830626      
Refseq ID (protein) NP_001154697.2 
NP_196352.2 


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