[←][→] ath   AT5G61780 Gene
functional annotation
Function   TUDOR-SN protein 2  
GO BP
GO:0010372 [list] [network] positive regulation of gibberellin biosynthetic process  (3 genes)  IMP  
GO:0009306 [list] [network] protein secretion  (16 genes)  IGI  
GO:0009686 [list] [network] gibberellin biosynthetic process  (26 genes)  IMP  
GO:0034605 [list] [network] cellular response to heat  (67 genes)  IDA  
GO:0006402 [list] [network] mRNA catabolic process  (80 genes)  IGI IMP  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO:0006401 [list] [network] RNA catabolic process  (97 genes)  IBA  
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IGI  
GO CC
GO:0016442 [list] [network] RISC complex  (3 genes)  IEA  
GO:0010494 [list] [network] cytoplasmic stress granule  (20 genes)  IDA  
GO:0048471 [list] [network] perinuclear region of cytoplasm  (23 genes)  IEA  
GO:0000932 [list] [network] P-body  (56 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IBA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA IDA TAS  
KEGG
Protein NP_200986.1 
BLAST NP_200986.1 
Orthologous [Ortholog page] Tudor1 (ath)  LOC4329508 (osa)  LOC7456667 (ppo)  LOC11434089 (mtr)  LOC100244222 (vvi)  LOC100256648 (vvi)  LOC100280237 (zma)  LOC100782692 (gma)  LOC100794481 (gma)  LOC100802766 (gma)  LOC100809534 (gma)  LOC101247006 (sly)  LOC101247307 (sly)  LOC103627215 (zma)  LOC103850652 (bra)  LOC103854960 (bra)  LOC103855724 (bra)  LOC103873470 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 2,  nucl 1,  mito 1  (predict for NP_200986.1)
Subcellular
localization
TargetP
other 3  (predict for NP_200986.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with Tudor2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.9 Tudor1 TUDOR-SN protein 1 [detail] 830626
9.4 ACBP4 acyl-CoA binding protein 4 [detail] 819707
9.2 AT1G70770 transmembrane protein (Protein of unknown function DUF2359, transmembrane) [detail] 843414
8.1 AT3G07810 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819972
5.0 AT3G45090 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 823644
Coexpressed
gene list		 [Coexpressed gene list for Tudor2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247517_at
247517_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247517_at
247517_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247517_at
247517_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836300      
Refseq ID (protein) NP_200986.1 


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