[←][→] ath   AT5G09920 Gene
functional annotation
Function   RNA polymerase II, Rpb4, core protein  
GO BP
GO:0031990 [list] [network] mRNA export from nucleus in response to heat stress  (1 genes)  IBA  
GO:0034402 [list] [network] recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex  (2 genes)  IBA  
GO:0045948 [list] [network] positive regulation of translational initiation  (3 genes)  IBA  
GO:0000288 [list] [network] nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay  (29 genes)  IBA  
GO:0006367 [list] [network] transcription initiation from RNA polymerase II promoter  (29 genes)  IBA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  TAS  
GO CC
GO:0005665 [list] [network] RNA polymerase II, core complex  (22 genes)  IBA IDA IPI  
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031369 [list] [network] translation initiation factor binding  (16 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA IDA  
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_196554.1 
BLAST NP_196554.1 
Orthologous [Ortholog page] LOC4328083 (osa)  LOC11418894 (mtr)  LOC100245383 (vvi)  LOC100282338 (zma)  LOC100499661 (gma)  LOC100527316 (gma)  LOC100527704 (gma)  LOC101264016 (sly)  LOC103846853 (bra)  LOC103850351 (bra)  LOC103855841 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  extr 2,  cyto_nucl 2  (predict for NP_196554.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196554.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with NRPB4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 INH3 inhibitor-3 [detail] 817688
6.6 AT2G34160 Alba DNA/RNA-binding protein [detail] 817977
6.6 AT2G39440 ribonuclease H2 subunit C-like protein [detail] 818529
5.9 AT2G24592 [detail] 28718300
5.0 AT1G36380 transmembrane protein [detail] 840544
Coexpressed
gene list		 [Coexpressed gene list for NRPB4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250510_at
250510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250510_at
250510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250510_at
250510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830853      
Refseq ID (protein) NP_196554.1 


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