[←][→] ath   AT5G10350 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008143 [list] [network] poly(A) binding  (19 genes)  IDA  
GO:0043621 [list] [network] protein self-association  (96 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001318527.1  NP_001330728.1  NP_001330729.1  NP_001330730.1  NP_196597.1  NP_850803.1 
BLAST NP_001318527.1  NP_001330728.1  NP_001330729.1  NP_001330730.1  NP_196597.1  NP_850803.1 
Orthologous [Ortholog page] PABN1 (ath)  AT5G65260 (ath)  LOC4330785 (osa)  LOC4340509 (osa)  LOC7456678 (ppo)  LOC7492020 (ppo)  LOC11406230 (mtr)  LOC11433289 (mtr)  LOC25501878 (mtr)  LOC100194063 (zma)  LOC100242522 (vvi)  LOC100282115 (zma)  LOC100285979 (zma)  LOC100527139 (gma)  LOC100527545 (gma)  LOC100784473 (gma)  LOC100789721 (gma)  LOC100791351 (gma)  LOC100809403 (gma)  LOC100855316 (vvi)  LOC101247002 (sly)  LOC101260498 (sly)  LOC101268437 (sly)  LOC103855290 (bra)  LOC103857200 (bra)  LOC103864862 (bra)  LOC103873956 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001318527.1)
nucl 4,  cyto 4,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001330728.1)
nucl 4,  cyto 4,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001330729.1)
nucl 4,  cyto 4,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001330730.1)
nucl 6,  cyto 2,  chlo 1  (predict for NP_196597.1)
chlo 4,  nucl 4,  cyto 3  (predict for NP_850803.1)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for NP_001318527.1)
scret 6,  other 5  (predict for NP_001330728.1)
scret 6,  other 5  (predict for NP_001330729.1)
scret 6,  other 5  (predict for NP_001330730.1)
other 9  (predict for NP_196597.1)
other 9  (predict for NP_850803.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT5G10350 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 AT5G65260 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836651
5.8 AT3G05070 Cwf18 pre-mRNA splicing factor [detail] 819669
5.5 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein [detail] 839399
Coexpressed
gene list		 [Coexpressed gene list for AT5G10350]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250436_at
250436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250436_at
250436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250436_at
250436_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830899      
Refseq ID (protein) NP_001318527.1 
NP_001330728.1 
NP_001330729.1 
NP_001330730.1 
NP_196597.1 
NP_850803.1 


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