[←][→] ath   AT5G17290 Gene
functional annotation
Function   autophagy protein Apg5 family  
GO BP
GO:0006501 [list] [network] C-terminal protein lipidation  (3 genes)  IBA  
GO:0000422 [list] [network] autophagy of mitochondrion  (12 genes)  IBA  
GO:0000045 [list] [network] autophagosome assembly  (19 genes)  IBA  
GO:0006995 [list] [network] cellular response to nitrogen starvation  (33 genes)  IBA  
GO:0006914 [list] [network] autophagy  (55 genes)  IMP  
GO:0010150 [list] [network] leaf senescence  (111 genes)  IMP  
GO:0042594 [list] [network] response to starvation  (215 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IEP  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0034274 [list] [network] Atg12-Atg5-Atg16 complex  (2 genes)  IBA  
GO:0034045 [list] [network] phagophore assembly site membrane  (9 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0019776 [list] [network] Atg8 ligase activity  (4 genes)  IBA  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_197231.1 
BLAST NP_197231.1 
Orthologous [Ortholog page] LOC732567 (gma)  LOC732728 (zma)  LOC4328092 (osa)  LOC11433638 (mtr)  LOC100249011 (vvi)  LOC100789045 (gma)  LOC101261376 (sly)  LOC103846258 (bra)  LOC103851096 (bra) 
Subcellular
localization
wolf
cyto 3,  nucl 1,  extr 1,  E.R. 1,  cyto_pero 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_197231.1)
Subcellular
localization
TargetP
other 7  (predict for NP_197231.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with APG5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 VTI1B Vesicle transport v-SNARE family protein [detail] 839208
6.4 LCL1 LHY/CCA1-like 1 [detail] 831766
6.3 AT5G04910 DNA repair REX1-B protein [detail] 830373
5.6 AT1G55000 peptidoglycan-binding LysM domain-containing protein [detail] 841942
Coexpressed
gene list		 [Coexpressed gene list for APG5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250088_at
250088_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250088_at
250088_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250088_at
250088_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831594      
Refseq ID (protein) NP_197231.1 


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