[←][→] ath   AT5G18230 Gene
functional annotation
Function   transcription regulator NOT2/NOT3/NOT5 family protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001154716.1  NP_001330084.1  NP_001330085.1  NP_568361.1 
BLAST NP_001154716.1  NP_001330084.1  NP_001330085.1  NP_568361.1 
Orthologous [Ortholog page] LOC4333598 (osa)  LOC11437872 (mtr)  LOC100193927 (zma)  LOC100253711 (vvi)  LOC100780204 (gma)  LOC100783415 (gma)  LOC100785965 (gma)  LOC100819202 (gma)  LOC101245924 (sly)  LOC103643788 (zma)  LOC103845854 (bra)  LOC103856292 (bra)  LOC103856293 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001154716.1)
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001330084.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_001330085.1)
nucl 7,  cyto 2  (predict for NP_568361.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001154716.1)
other 8  (predict for NP_001330084.1)
other 9  (predict for NP_001330085.1)
other 8  (predict for NP_568361.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G18230 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 LBA1 RNA helicase [detail] 834747
6.4 NRPB1 RNA polymerase II large subunit [detail] 829734
6.4 SYN4 sister chromatid cohesion 1 protein 4 [detail] 831487
5.0 MPK16 mitogen-activated protein kinase 16 [detail] 832019
Coexpressed
gene list		 [Coexpressed gene list for AT5G18230]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250035_at
250035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250035_at
250035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250035_at
250035_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831941      
Refseq ID (protein) NP_001154716.1 
NP_001330084.1 
NP_001330085.1 
NP_568361.1 


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