[←][→] ath   AT5G20570 Gene
functional annotation
Function   RING-box 1  
GO BP
GO:0009733 [list] [network] response to auxin  (407 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA TAS  
GO CC
GO:0031463 [list] [network] Cul3-RING ubiquitin ligase complex  (4 genes)  IPI  
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001154725.1  NP_001154726.1  NP_568396.1 
BLAST NP_001154725.1  NP_001154726.1  NP_568396.1 
Orthologous
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 2  (predict for NP_001154725.1)
chlo 4,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_001154726.1)
chlo 4,  cyto 4,  nucl 1,  extr 1  (predict for NP_568396.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_001154725.1)
other 8,  chlo 5  (predict for NP_001154726.1)
other 8,  chlo 3  (predict for NP_568396.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath00190 Oxidative phosphorylation 2
ath03050 Proteasome 2
ath03040 Spliceosome 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with RBX1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT5G05360 hypothetical protein [detail] 830418
6.9 AT5G18800 Cox19-like CHCH family protein [detail] 831998
6.8 SKP1 S phase kinase-associated protein 1 [detail] 843928
6.7 LSM3B Small nuclear ribonucleoprotein family protein [detail] 844021
6.6 COP9 COP9 signalosome, subunit CSN8 [detail] 827049
4.5 AT1G52370 Ribosomal protein L22p/L17e family protein [detail] 841667
Coexpressed
gene list		 [Coexpressed gene list for RBX1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246089_at
246089_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246089_at
246089_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246089_at
246089_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832179      
Refseq ID (protein) NP_001154725.1 
NP_001154726.1 
NP_568396.1 


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