[←][→] ath   AT5G41190 Gene
functional annotation
Function   RNA-binding NOB1-like protein  
GO BP
GO:0000469 [list] [network] cleavage involved in rRNA processing  (17 genes)  IDA  
GO:0030490 [list] [network] maturation of SSU-rRNA  (36 genes)  IBA  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (9 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004521 [list] [network] endoribonuclease activity  (85 genes)  IBA IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_198935.1 
BLAST NP_198935.1 
Orthologous [Ortholog page] LOC4328064 (osa)  LOC7465848 (ppo)  LOC11435776 (mtr)  LOC100258154 (vvi)  LOC100276745 (zma)  LOC100276770 (zma)  LOC100785714 (gma)  LOC100800291 (gma)  LOC101252008 (sly)  LOC103850212 (bra)  LOC103864065 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 1,  pero 1,  mito_plas 1  (predict for NP_198935.1)
Subcellular
localization
TargetP
other 8  (predict for NP_198935.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT5G41190 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.9 AT4G34910 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 829643
10.9 AT5G14050 Transducin/WD40 repeat-like superfamily protein [detail] 831254
10.7 AT5G14520 pescadillo-like protein [detail] 831303
10.0 AT5G15810 tRNA (guanine(26)-N(2))-dimethyltransferase [detail] 831438
9.5 ECT3 evolutionarily conserved C-terminal region 3 [detail] 836223
9.3 EIF3B-2 eukaryotic translation initiation factor 3B-2 [detail] 832647
8.6 AtNug2 GTP-binding family protein [detail] 841731
8.6 AT5G24840 tRNA (guanine-N-7) methyltransferase [detail] 832553
7.3 TOC64-III translocon at the outer membrane of chloroplasts 64-III [detail] 819660
6.1 AT4G00238 DNA-binding storekeeper protein-related transcriptional regulator [detail] 825892
Coexpressed
gene list		 [Coexpressed gene list for AT5G41190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249315_at
249315_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249315_at
249315_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249315_at
249315_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834121      
Refseq ID (protein) NP_198935.1 


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