[←][→] ath   AT5G46210 Gene
functional annotation
Function   cullin4  
GO BP
GO:0048575 [list] [network] short-day photoperiodism, flowering  (4 genes)  IMP  
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (13 genes)  IMP  
GO:0010182 [list] [network] sugar mediated signaling pathway  (37 genes)  IMP  
GO:0048825 [list] [network] cotyledon development  (54 genes)  IMP  
GO:0000209 [list] [network] protein polyubiquitination  (71 genes)  IDA  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  IMP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (194 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0009908 [list] [network] flower development  (447 genes)  IMP  
GO:0010154 [list] [network] fruit development  (753 genes)  IMP  
GO:0009755 [list] [network] hormone-mediated signaling pathway  (774 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (812 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IPI  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  IPI  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_568658.1 
BLAST NP_568658.1 
Orthologous [Ortholog page] CUL4 (sly)  LOC4334354 (osa)  LOC11437813 (mtr)  LOC100233055 (vvi)  LOC100501431 (zma)  LOC100779748 (gma)  LOC100797895 (gma)  LOC100805491 (gma)  LOC101248739 (sly)  LOC103625822 (zma)  LOC103827747 (bra)  LOC103839622 (bra)  LOC103853691 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 2  (predict for NP_568658.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_568658.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with CUL4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 CUL1 cullin 1 [detail] 825648
7.8 AT5G47690 binding protein [detail] 834820
7.4 CHR11 chromatin-remodeling protein 11 [detail] 819814
5.4 AT3G26730 RING/U-box superfamily protein [detail] 822285
5.3 AT5G26760 RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [detail] 832734
Coexpressed
gene list		 [Coexpressed gene list for CUL4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248882_at
248882_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248882_at
248882_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248882_at
248882_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834663      
Refseq ID (protein) NP_568658.1 


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