[←][→] ath   AT5G54810 Gene
functional annotation
Function   tryptophan synthase beta-subunit 1  
GO BP
GO:0009684 [list] [network] indoleacetic acid biosynthetic process  (11 genes)  TAS  
GO:0000162 [list] [network] tryptophan biosynthetic process  (22 genes)  IBA IEA TAS  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IEP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM ISS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004834 [list] [network] tryptophan synthase activity  (6 genes)  IBA IDA IMP  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_200292.1 
BLAST NP_200292.1 
Orthologous [Ortholog page] LOC732803 (zma)  LOC732842 (zma)  TSB2 (ath)  AT5G28237 (ath)  LOC4344612 (osa)  LOC7485533 (ppo)  LOC11424595 (mtr)  LOC11446449 (mtr)  LOC11446499 (mtr)  TSB (gma)  LOC100250414 (vvi)  LOC100264166 (vvi)  LOC100792812 (gma)  LOC100801288 (gma)  LOC101249965 (sly)  LOC101254921 (sly)  LOC101256422 (sly)  LOC101256529 (sly)  LOC103836224 (bra)  LOC103836225 (bra)  LOC103837846 (bra)  LOC103844934 (bra)  LOC103861672 (bra) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_200292.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200292.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00260 Glycine, serine and threonine metabolism 4
ath00071 Fatty acid degradation 2
ath00380 Tryptophan metabolism 2
Genes directly connected with TSB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.7 TSA1 tryptophan synthase alpha chain [detail] 824629
9.0 TRP1 tryptophan biosynthesis 1 [detail] 831666
8.7 PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 [detail] 837613
6.2 ACO1 aconitase 1 [detail] 829737
Coexpressed
gene list		 [Coexpressed gene list for TSB1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 835571      
Refseq ID (protein) NP_200292.1 


The preparation time of this page was 0.2 [sec].