ATTED-II : GeneID search result

[←][→] ath AT5G58610 Gene

functional annotation

Function

PHD finger transcription factor

GO BP

GO:0010200 [list] [network] response to chitin

(142 genes)

IEP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

GO:0046872 [list] [network] metal ion binding

(3180 genes)

IEA

KEGG

Protein

NP_001330111.1 NP_001330112.1 NP_001330113.1 NP_001330114.1 NP_001330115.1 NP_001330116.1 NP_001330117.1 NP_001330118.1 NP_001330119.1 NP_001330120.1 NP_200669.1

BLAST

NP_001330111.1 NP_001330112.1 NP_001330113.1 NP_001330114.1 NP_001330115.1 NP_001330116.1 NP_001330117.1 NP_001330118.1 NP_001330119.1 NP_001330120.1 NP_200669.1

Orthologous

[Ortholog page] AT5G63900 (ath) LOC11405488 (mtr) LOC11409908 (mtr) LOC11410633 (mtr) LOC11429698 (mtr) LOC11432528 (mtr) LOC25489963 (mtr) LOC25489964 (mtr) LOC25490920 (mtr) LOC100243375 (vvi) LOC100384354 (zma) LOC100806062 (gma) LOC100814680 (gma) LOC100818931 (gma) LOC101245266 (sly) LOC101264968 (sly) LOC101267496 (sly) LOC102668789 (gma) LOC103634445 (zma) LOC103837508 (bra) LOC103845294 (bra) LOC103873810 (bra) LOC104879177 (vvi) LOC104879607 (vvi) LOC107275606 (osa)

Subcellular
localization
wolf

nucl 5, cyto 4, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330111.1)
nucl 7, cyto 2	(predict for NP_001330112.1)
nucl 4, chlo 2, cyto 2, cysk_nucl 2, nucl_plas 2	(predict for NP_001330113.1)
nucl 4, cyto 3, chlo 2, cysk_nucl 2, nucl_plas 2	(predict for NP_001330114.1)
nucl 5, cyto 4, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330115.1)
nucl 5, chlo 3, cyto 1, chlo_mito 1	(predict for NP_001330116.1)
nucl 6, cyto 2, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330117.1)
nucl 4, chlo 4, cyto 1	(predict for NP_001330118.1)
nucl 5, cyto 2, chlo 1, cyto_pero 1	(predict for NP_001330119.1)
nucl 5, cyto 4, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330120.1)
nucl 5, cyto 2, chlo 1, cyto_pero 1	(predict for NP_200669.1)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for NP_001330111.1)
other 8	(predict for NP_001330112.1)
scret 6, mito 3	(predict for NP_001330113.1)
scret 6, mito 3	(predict for NP_001330114.1)
other 8, chlo 3	(predict for NP_001330115.1)
scret 6, mito 3	(predict for NP_001330116.1)
other 8, chlo 3	(predict for NP_001330117.1)
scret 6, mito 3	(predict for NP_001330118.1)
scret 6, mito 3	(predict for NP_001330119.1)
other 8, chlo 3	(predict for NP_001330120.1)
scret 6, mito 3	(predict for NP_200669.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT5G58610]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247772_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247772_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247772_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835975
Refseq ID (protein)	NP_001330111.1
	NP_001330112.1
	NP_001330113.1
	NP_001330114.1
	NP_001330115.1
	NP_001330116.1
	NP_001330117.1
	NP_001330118.1
	NP_001330119.1
	NP_001330120.1
	NP_200669.1

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