[←][→] ath   AT5G58620 Gene
functional annotation
Function   zinc finger (CCCH-type) family protein  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_200670.1 
BLAST NP_200670.1 
Orthologous [Ortholog page] CZF1 (ath)  SZF1 (ath)  LOC7467993 (ppo)  LOC7481474 (ppo)  LOC7490324 (ppo)  LOC11408632 (mtr)  LOC11415853 (mtr)  LOC11423139 (mtr)  LOC11429482 (mtr)  LOC100246707 (vvi)  LOC100265670 (vvi)  LOC100783376 (gma)  LOC100787878 (gma)  LOC100795085 (gma)  LOC100806121 (gma)  LOC100812481 (gma)  LOC100819521 (gma)  LOC101257277 (sly)  LOC101258155 (sly)  LOC103841501 (bra)  LOC103845296 (bra)  LOC103857910 (bra)  LOC103866976 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  golg 1  (predict for NP_200670.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for NP_200670.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G58620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 AT1G07870 Protein kinase superfamily protein [detail] 837302
4.6 OXS2 CCCH-type zinc finger protein with ARM repeat domain-containing protein [detail] 818790
4.5 AT2G43320 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 818933
4.1 MYB109 myb domain protein 109 [detail] 824739
Coexpressed
gene list		 [Coexpressed gene list for AT5G58620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247795_at
247795_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247795_at
247795_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247795_at
247795_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835976      
Refseq ID (protein) NP_200670.1 


The preparation time of this page was 0.1 [sec].