[←][→] ath   AT5G59980 Gene
functional annotation
Function   Polymerase/histidinol phosphatase-like protein  
GO BP
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0048868 [list] [network] pollen tube development  (186 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001154789.1  NP_001332678.1  NP_001332679.1  NP_200806.2 
BLAST NP_001154789.1  NP_001332678.1  NP_001332679.1  NP_200806.2 
Orthologous [Ortholog page] LOC4349529 (osa)  LOC4351650 (osa)  LOC7488147 (ppo)  LOC9271052 (osa)  LOC11408905 (mtr)  LOC100241609 (vvi)  LOC100279258 (zma)  LOC100776746 (gma)  LOC101253090 (sly)  LOC102660170 (gma)  LOC103845416 (bra)  LOC103851531 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001154789.1)
nucl 8,  cyto 2  (predict for NP_001332678.1)
nucl 8,  cyto 1  (predict for NP_001332679.1)
nucl 6,  cyto 3  (predict for NP_200806.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001154789.1)
other 9  (predict for NP_001332678.1)
other 9  (predict for NP_001332679.1)
other 9  (predict for NP_200806.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
Genes directly connected with GAF1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT5G54910 DEA(D/H)-box RNA helicase family protein [detail] 835582
8.4 AT1G69070 nucleolar-like protein [detail] 843239
8.3 AT1G30960 GTP-binding family protein [detail] 839983
Coexpressed
gene list		 [Coexpressed gene list for GAF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247676_at
247676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247676_at
247676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247676_at
247676_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836120      
Refseq ID (protein) NP_001154789.1 
NP_001332678.1 
NP_001332679.1 
NP_200806.2 


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