[←][→] ath   AT5G60170 Gene
functional annotation
Function   RNA binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001190578.1  NP_200825.2 
BLAST NP_001190578.1  NP_200825.2 
Orthologous [Ortholog page] AT2G28540 (ath)  AT3G45630 (ath)  LOC4325536 (osa)  LOC4349535 (osa)  LOC4351244 (osa)  LOC7465293 (ppo)  LOC7488143 (ppo)  LOC11406476 (mtr)  LOC11417361 (mtr)  LOC25484052 (mtr)  LOC100267264 (vvi)  LOC100381591 (zma)  LOC100384257 (zma)  LOC100501174 (zma)  LOC100780302 (gma)  LOC100796804 (gma)  LOC100801880 (gma)  LOC100805811 (gma)  LOC100807521 (gma)  LOC100813427 (gma)  LOC101247127 (sly)  LOC101251877 (sly)  LOC101252746 (sly)  LOC101257555 (sly)  LOC103647171 (zma)  LOC103649602 (zma)  LOC103829751 (bra)  LOC103833848 (bra)  LOC103846171 (bra)  LOC103856582 (bra)  LOC103856584 (bra)  LOC103864897 (bra)  LOC103873411 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for NP_001190578.1)
nucl 9,  cyto 1,  vacu 1  (predict for NP_200825.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001190578.1)
other 9  (predict for NP_200825.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G60170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 823705
9.1 SMG7 Telomerase activating protein Est1 [detail] 832060
8.1 AT4G30100 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 829133
7.5 AT4G03260 Outer arm dynein light chain 1 protein [detail] 828003
7.3 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 817402
6.9 ML1 MEI2-like protein 1 [detail] 836317
6.7 AT2G39950 flocculation protein [detail] 818582
6.5 AT1G51350 ARM repeat superfamily protein [detail] 841558
6.3 AT5G66810 Ran-binding protein in the microtubule-organising centre protein [detail] 836814
6.1 PK1 protein-serine kinase 1 [detail] 820020
4.4 AT4G32920 glycine-rich protein [detail] 829429
Coexpressed
gene list		 [Coexpressed gene list for AT5G60170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247669_at
247669_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247669_at
247669_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247669_at
247669_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836139      
Refseq ID (protein) NP_001190578.1 
NP_200825.2 


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