[←][→] ath   AT5G60920 Gene
functional annotation
Function   COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family  
GO BP
GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process  (10 genes)  IBA  
GO:0010215 [list] [network] cellulose microfibril organization  (15 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (39 genes)  IMP  
GO:0009664 [list] [network] plant-type cell wall organization  (145 genes)  IBA  
GO:0009832 [list] [network] plant-type cell wall biogenesis  (150 genes)  IBA  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IMP  
GO CC
GO:0009930 [list] [network] longitudinal side of cell surface  (1 genes)  IDA  
GO:0009897 [list] [network] external side of plasma membrane  (4 genes)  ISS  
GO:0016328 [list] [network] lateral plasma membrane  (5 genes)  IEA  
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  IBA IDA  
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IDA  
GO:0031225 [list] [network] anchored component of membrane  (303 genes)  TAS  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA ISM  
GO MF
KEGG
Protein NP_001330939.1  NP_568930.1 
BLAST NP_001330939.1  NP_568930.1 
Orthologous [Ortholog page] LOC541793 (zma)  COBL1 (ath)  COBL2 (ath)  COBL6 (ath)  LOC4333115 (osa)  LOC4334147 (osa)  LOC4338658 (osa)  LOC4343844 (osa)  LOC7453627 (ppo)  LOC11411610 (mtr)  LOC25495418 (mtr)  LOC25495419 (mtr)  LOC25497596 (mtr)  LOC100037798 (zma)  LOC100037799 (zma)  LOC100263436 (vvi)  LOC100263971 (vvi)  LOC100264075 (vvi)  LOC100267982 (vvi)  LOC100305816 (gma)  LOC100782876 (gma)  LOC100783820 (gma)  LOC100809729 (gma)  LOC100811581 (gma)  LOC100815779 (gma)  COBRA-like (sly)  LOC101252834 (sly)  LOC101253637 (sly)  LOC101259823 (sly)  LOC101260090 (sly)  LOC103836309 (bra)  LOC103837359 (bra)  LOC103849801 (bra)  LOC103860552 (bra)  LOC103870928 (bra)  LOC103871751 (bra)  LOC103875066 (bra)  LOC112940047 (sly) 
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  E.R. 2  (predict for NP_001330939.1)
plas 3,  golg_plas 3,  golg 2,  mito 1,  vacu 1,  chlo 1,  extr 1,  cyto_mito 1,  E.R._vacu 1  (predict for NP_568930.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001330939.1)
scret 9  (predict for NP_568930.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with COB on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.9 CEV1 Cellulose synthase family protein [detail] 830399
12.2 CESA1 cellulose synthase 1 [detail] 829376
10.6 POM1 Chitinase family protein [detail] 837095
9.1 MPK20 MAP kinase 20 [detail] 818888
8.1 AT5G06700 trichome birefringence-like protein (DUF828) [detail] 830559
7.8 AT1G76670 Nucleotide-sugar transporter family protein [detail] 844000
7.5 SRF7 STRUBBELIG-receptor family 7 [detail] 820655
7.2 AT2G32580 transmembrane protein, putative (DUF1068) [detail] 817818
6.9 AXS2 UDP-D-apiose/UDP-D-xylose synthase 2 [detail] 837341
6.8 GAE6 UDP-D-glucuronate 4-epimerase 6 [detail] 821965
4.3 RABA5E Rab GTPase-like A5A protein [detail] 837091
Coexpressed
gene list		 [Coexpressed gene list for COB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247552_at
247552_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247552_at
247552_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247552_at
247552_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836213      
Refseq ID (protein) NP_001330939.1 
NP_568930.1 


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