ATTED-II : GeneID search result

[←][→] ath AT1G09790 Gene

functional annotation

Function

COBRA-like protein 6 precursor

GO BP

GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process	(10 genes)	IBA
GO:0010215 [list] [network] cellulose microfibril organization	(15 genes)	IEA
GO:0009664 [list] [network] plant-type cell wall organization	(145 genes)	IBA
GO:0009832 [list] [network] plant-type cell wall biogenesis	(150 genes)	IBA

GO CC

GO:0046658 [list] [network] anchored component of plasma membrane	(154 genes)	IBA
GO:0031225 [list] [network] anchored component of membrane	(303 genes)	TAS
GO:0005886 [list] [network] plasma membrane	(3771 genes)	ISM

GO MF

KEGG

Protein

NP_001322459.1 NP_172450.2

BLAST

NP_001322459.1 NP_172450.2

Orthologous

[Ortholog page] LOC541793 (zma) COBL1 (ath) COBL2 (ath) COB (ath) LOC4333115 (osa) LOC4334147 (osa) LOC4338658 (osa) LOC4343844 (osa) LOC7453627 (ppo) LOC11411610 (mtr) LOC25495418 (mtr) LOC25495419 (mtr) LOC25497596 (mtr) LOC100037798 (zma) LOC100037799 (zma) LOC100263436 (vvi) LOC100263971 (vvi) LOC100264075 (vvi) LOC100267982 (vvi) LOC100305816 (gma) LOC100782876 (gma) LOC100783820 (gma) LOC100809729 (gma) LOC100811581 (gma) LOC100815779 (gma) COBRA-like (sly) LOC101252834 (sly) LOC101253637 (sly) LOC101259823 (sly) LOC101260090 (sly) LOC103836309 (bra) LOC103837359 (bra) LOC103849801 (bra) LOC103860552 (bra) LOC103870928 (bra) LOC103871751 (bra) LOC103875066 (bra) LOC112940047 (sly)

Subcellular
localization
wolf

plas 5, vacu 3, golg_plas 3, cyto_plas 3	(predict for NP_001322459.1)
plas 4, golg_plas 4, vacu 3, golg 2	(predict for NP_172450.2)

Subcellular
localization
TargetP

scret 8	(predict for NP_001322459.1)
scret 9	(predict for NP_172450.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for COBL6]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264710_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264710_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264710_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837508
Refseq ID (protein)	NP_001322459.1
Refseq ID (protein)	NP_172450.2

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