[←][→] ath   AT5G60980 Gene
functional annotation
Function   Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein  
GO BP
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IDA  
GO CC
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001331368.1  NP_001331369.1  NP_200906.2  NP_851235.1 
BLAST NP_001331368.1  NP_001331369.1  NP_200906.2  NP_851235.1 
Orthologous [Ortholog page] LOC4329411 (osa)  LOC4333125 (osa)  LOC4335600 (osa)  LOC4343835 (osa)  LOC7498214 (ppo)  LOC11446183 (mtr)  LOC25493895 (mtr)  LOC25497521 (mtr)  LOC100193813 (zma)  LOC100216804 (zma)  LOC100250757 (vvi)  LOC100255231 (vvi)  LOC100258271 (vvi)  LOC100284101 (zma)  LOC100382436 (zma)  LOC100382927 (zma)  LOC100801253 (gma)  LOC100805494 (gma)  LOC100805610 (gma)  LOC100816288 (gma)  LOC101248437 (sly)  LOC101250028 (sly)  LOC101255859 (sly)  LOC101257417 (sly)  LOC101259102 (sly)  LOC103837363 (bra)  LOC103854928 (bra)  LOC103860560 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001331368.1)
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001331369.1)
cyto 5,  nucl 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_200906.2)
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_851235.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001331368.1)
other 6  (predict for NP_001331369.1)
other 6  (predict for NP_200906.2)
other 6  (predict for NP_851235.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT5G60980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 ATU2AF35A U2 snRNP auxiliary factor small subunit [detail] 839657
6.2 ECT2 evolutionarily conserved C-terminal region 2 [detail] 820548
6.0 AT3G49310 Major facilitator superfamily protein [detail] 824093
5.5 AT1G22790 Low affinity potassium transport system protein [detail] 838885
5.0 AT2G18110 Translation elongation factor EF1B/ribosomal protein S6 family protein [detail] 816323
Coexpressed
gene list		 [Coexpressed gene list for AT5G60980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247551_at
247551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247551_at
247551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247551_at
247551_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836219      
Refseq ID (protein) NP_001331368.1 
NP_001331369.1 
NP_200906.2 
NP_851235.1 


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