[←][→] ath   AT5G60990 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_568931.1 
BLAST NP_568931.1 
Orthologous [Ortholog page] LOC4333678 (osa)  LOC7455835 (ppo)  LOC7495753 (ppo)  LOC11437150 (mtr)  LOC25498396 (mtr)  LOC100193011 (zma)  LOC100246466 (vvi)  LOC100775796 (gma)  DEAD31 (sly)  LOC103854930 (bra)  LOC103860561 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_568931.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568931.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT5G60990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.8 AT3G23620 Ribosomal RNA processing Brix domain protein [detail] 821942
10.7 MEE49 Ribosomal RNA processing Brix domain protein [detail] 828136
10.7 RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835833
10.2 AT4G18905 Transducin/WD40 repeat-like superfamily protein [detail] 827625
9.4 La1 La protein 1 [detail] 829408
9.3 AT3G49990 Low temperature viability protein [detail] 824161
9.0 AT4G19610 nucleotide/nucleic acid binding protein [detail] 827703
8.3 RH36 RNA helicase 36 [detail] 838197
8.3 EIF3B-2 eukaryotic translation initiation factor 3B-2 [detail] 832647
6.5 AT1G22950 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 838902
6.5 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein [detail] 819918
6.5 AT5G46550 DNA-binding bromodomain-containing protein [detail] 834698
Coexpressed
gene list		 [Coexpressed gene list for AT5G60990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247608_at
247608_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247608_at
247608_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247608_at
247608_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836220      
Refseq ID (protein) NP_568931.1 


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