ATTED-II : GeneID search result

[←][→] ath AT5G61960 Gene

functional annotation

Function

MEI2-like protein 1

GO BP

GO:0045836 [list] [network] positive regulation of meiotic nuclear division	(6 genes)	IGI
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome	(30 genes)	IBA
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome	(38 genes)	IBA
GO:0051321 [list] [network] meiotic cell cycle	(166 genes)	IEA
GO:0048507 [list] [network] meristem development	(207 genes)	IGI

GO CC

GO:0016607 [list] [network] nuclear speck	(86 genes)	IBA
GO:0005634 [list] [network] nucleus	(10793 genes)	IBA ISM

GO MF

GO:0003729 [list] [network] mRNA binding	(1026 genes)	IDA
GO:0003723 [list] [network] RNA binding	(1790 genes)	IBA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001032122.1 NP_001318861.1 NP_001330764.1 NP_001330765.1 NP_001330766.1 NP_001330767.1 NP_001330768.1 NP_001330769.1 NP_001330770.1 NP_001330771.1 NP_568946.1

BLAST

NP_001032122.1 NP_001318861.1 NP_001330764.1 NP_001330765.1 NP_001330766.1 NP_001330767.1 NP_001330768.1 NP_001330769.1 NP_001330770.1 NP_001330771.1 NP_568946.1

Orthologous

[Ortholog page] AML1 (sly) ML4 (ath) LOC7456646 (ppo) LOC7481178 (ppo) LOC9271988 (osa) LOC11427537 (mtr) LOC11429692 (mtr) LOC11443824 (mtr) LOC100192762 (zma) LOC100193681 (zma) LOC100260954 (vvi) LOC100261030 (vvi) LOC100797616 (gma) LOC100797697 (gma) LOC100797893 (gma) LOC100801025 (gma) LOC103653544 (zma) LOC103655045 (zma) LOC103847071 (bra) LOC103854965 (bra) LOC103874632 (bra) LOC106798747 (gma)

Subcellular
localization
wolf

nucl 7, pero 1, extr 1, vacu 1, cyto_pero 1	(predict for NP_001032122.1)
nucl 7, pero 1, extr 1, vacu 1, cyto_pero 1	(predict for NP_001318861.1)
nucl 8, pero 1	(predict for NP_001330764.1)
nucl 7, pero 1, extr 1, vacu 1, cyto_pero 1	(predict for NP_001330765.1)
nucl 8, pero 1	(predict for NP_001330766.1)
nucl 8, pero 1	(predict for NP_001330767.1)
nucl 8, pero 1	(predict for NP_001330768.1)
nucl 8, pero 1	(predict for NP_001330769.1)
nucl 8, pero 1	(predict for NP_001330770.1)
nucl 8, pero 1	(predict for NP_001330771.1)
nucl 7, pero 1, extr 1, vacu 1, cyto_pero 1	(predict for NP_568946.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001032122.1)
other 9	(predict for NP_001318861.1)
other 8	(predict for NP_001330764.1)
other 9	(predict for NP_001330765.1)
other 8	(predict for NP_001330766.1)
other 8	(predict for NP_001330767.1)
other 8	(predict for NP_001330768.1)
other 8	(predict for NP_001330769.1)
other 8	(predict for NP_001330770.1)
other 8	(predict for NP_001330771.1)
other 9	(predict for NP_568946.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

Genes directly connected with ML1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.0	ML4	MEI2-like 4	[detail]	830620
7.4	UBP25	ubiquitin-specific protease 25	[detail]	820662
6.9	AT5G60170	RNA binding (RRM/RBD/RNP motifs) family protein	[detail]	836139
6.3	OXS2	CCCH-type zinc finger protein with ARM repeat domain-containing protein	[detail]	818790
5.7	Phox3	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein	[detail]	832158

Coexpressed
gene list

[Coexpressed gene list for ML1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247506_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247506_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247506_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836317
Refseq ID (protein)	NP_001032122.1
	NP_001318861.1
	NP_001330764.1
	NP_001330765.1
	NP_001330766.1
	NP_001330767.1
	NP_001330768.1
	NP_001330769.1
	NP_001330770.1
	NP_001330771.1
	NP_568946.1

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