[←][→] ath   AT5G66540 Gene
functional annotation
Function   U3 small nucleolar ribonucleoprotein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0034457 [list] [network] Mpp10 complex  (3 genes)  IBA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_001332723.1  NP_569037.1 
BLAST NP_001332723.1  NP_569037.1 
Orthologous [Ortholog page] LOC4349717 (osa)  LOC4351433 (osa)  LOC7453774 (ppo)  LOC7458040 (ppo)  LOC25493756 (mtr)  LOC100194088 (zma)  LOC100241507 (vvi)  LOC100781093 (gma)  LOC100817724 (gma)  LOC101253879 (sly)  LOC103829595 (bra)  LOC103837692 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001332723.1)
cyto 5,  nucl 4  (predict for NP_569037.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332723.1)
other 8  (predict for NP_569037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with AT5G66540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.5 AT4G16630 DEA(D/H)-box RNA helicase family protein [detail] 827364
13.4 AT2G18220 Noc2p family [detail] 816337
13.2 AT1G69070 nucleolar-like protein [detail] 843239
13.0 AT1G29320 Transducin/WD40 repeat-like superfamily protein [detail] 839806
12.5 AT1G60640 stress response protein [detail] 842358
11.0 AT5G38720 ribosomal RNA-processing 7 protein [detail] 833863
5.4 AT4G16141 GATA type zinc finger transcription factor family protein [detail] 827301
Coexpressed
gene list		 [Coexpressed gene list for AT5G66540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247046_at
247046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247046_at
247046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247046_at
247046_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836786      
Refseq ID (protein) NP_001332723.1 
NP_569037.1 


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