ATTED-II : GeneID search result

[←][→] ath AT5G66930 Gene

functional annotation

Function

meiotically up-regulated protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

KEGG

ath04136 [list] [network] Autophagy - other (40 genes)

Protein

NP_001154800.1 NP_569042.2 NP_851284.1

BLAST

NP_001154800.1 NP_569042.2 NP_851284.1

Orthologous

[Ortholog page] LOC4352156 (osa) LOC7477976 (ppo) LOC11406119 (mtr) LOC100265795 (vvi) LOC100275976 (zma) LOC100811916 (gma) LOC101253244 (sly) LOC101263274 (sly) LOC103829550 (bra) LOC103837724 (bra) LOC109939169 (zma)

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, cysk_nucl 1, nucl_plas 1	(predict for NP_001154800.1)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for NP_569042.2)
cyto 5, extr 3, nucl 1	(predict for NP_851284.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001154800.1)
other 8, scret 3	(predict for NP_569042.2)
other 8, scret 3	(predict for NP_851284.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G66930 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.8	AT5G18640	alpha/beta-Hydrolases superfamily protein	[detail]	831982
6.7	NF-YB13	nuclear factor Y, subunit B13	[detail]	832373
6.2	Cand2	Protein of unknown function, transmembrane-40	[detail]	819662
5.3	AT4G23895	Pleckstrin homology (PH) domain-containing protein	[detail]	2745723

Coexpressed
gene list

[Coexpressed gene list for AT5G66930]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247045_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247045_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247045_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836827
Refseq ID (protein)	NP_001154800.1
	NP_569042.2
	NP_851284.1

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