[←][→] ath   AT5G67580 Gene
functional annotation
Function   Homeodomain-like/winged-helix DNA-binding family protein  
GO BP
GO:0006334 [list] [network] nucleosome assembly  (34 genes)  IEA  
GO:0009739 [list] [network] response to gibberellin  (154 genes)  IEP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (297 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0000785 [list] [network] chromatin  (160 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003691 [list] [network] double-stranded telomeric DNA binding  (6 genes)  IDA  
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (11 genes)  IDA  
GO:0042162 [list] [network] telomeric DNA binding  (24 genes)  IDA  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_201559.1  NP_851286.1 
BLAST NP_201559.1  NP_851286.1 
Orthologous [Ortholog page] LOC542124 (zma)  LOC542683 (zma)  MYB85 (gma)  LOC778165 (gma)  MYB55 (gma)  TRB3 (ath)  TRB1 (ath)  LOC4324449 (osa)  LOC4352780 (osa)  LOC7464767 (ppo)  LOC7469640 (ppo)  LOC7497744 (ppo)  LOC11416450 (mtr)  LOC11434948 (mtr)  LOC11440962 (mtr)  LOC25480253 (mtr)  LOC25486339 (mtr)  LOC25502915 (mtr)  LOC100261713 (vvi)  LOC100273130 (zma)  LOC100274000 (zma)  LOC100780698 (gma)  LOC100796539 (gma)  LOC100853203 (vvi)  LOC100854718 (vvi)  LOC101247285 (sly)  LOC101248266 (sly)  LOC101263059 (sly)  LOC103827702 (bra)  LOC103832906 (bra)  LOC103837601 (bra)  LOC103849550 (bra)  LOC103871379 (bra)  LOC103874040 (bra) 
Subcellular
localization
wolf
nucl 4,  mito 3,  cyto_nucl 3  (predict for NP_201559.1)
nucl 4,  mito 3,  cyto_nucl 3  (predict for NP_851286.1)
Subcellular
localization
TargetP
other 8  (predict for NP_201559.1)
other 8  (predict for NP_851286.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with TRB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 AT5G64250 Aldolase-type TIM barrel family protein [detail] 836546
5.3 AT1G17820 testis-expressed sequence 2-like protein (DUF2404) [detail] 838360
5.3 AT5G22120 coiled-coil protein [detail] 832273
5.0 AT4G04320 malonyl-CoA decarboxylase family protein [detail] 825752
Coexpressed
gene list		 [Coexpressed gene list for TRB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247012_at
247012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247012_at
247012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247012_at
247012_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836894      
Refseq ID (protein) NP_201559.1 
NP_851286.1 


The preparation time of this page was 0.3 [sec].