[←][→] ath   AT1G49950 Gene
functional annotation
Function   telomere repeat binding factor 1  
GO BP
GO:0006334 [list] [network] nucleosome assembly  (34 genes)  IEA  
GO:0009739 [list] [network] response to gibberellin  (154 genes)  IEP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (297 genes)  IEP  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IGI  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0000785 [list] [network] chromatin  (160 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0032991 [list] [network] protein-containing complex  (2638 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0070491 [list] [network] repressing transcription factor binding  (1 genes)  IMP  
GO:1990841 [list] [network] promoter-specific chromatin binding  (4 genes)  IDA  
GO:0003691 [list] [network] double-stranded telomeric DNA binding  (6 genes)  IDA  
GO:0033613 [list] [network] activating transcription factor binding  (8 genes)  IMP  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_564559.1  NP_849789.1  NP_973998.1 
BLAST NP_564559.1  NP_849789.1  NP_973998.1 
Orthologous [Ortholog page] LOC542124 (zma)  LOC542683 (zma)  MYB85 (gma)  LOC778165 (gma)  MYB55 (gma)  TRB3 (ath)  TRB2 (ath)  LOC4324449 (osa)  LOC4352780 (osa)  LOC7464767 (ppo)  LOC7469640 (ppo)  LOC7497744 (ppo)  LOC11416450 (mtr)  LOC11434948 (mtr)  LOC11440962 (mtr)  LOC25480253 (mtr)  LOC25486339 (mtr)  LOC25502915 (mtr)  LOC100261713 (vvi)  LOC100273130 (zma)  LOC100274000 (zma)  LOC100780698 (gma)  LOC100796539 (gma)  LOC100853203 (vvi)  LOC100854718 (vvi)  LOC101247285 (sly)  LOC101248266 (sly)  LOC101263059 (sly)  LOC103827702 (bra)  LOC103832906 (bra)  LOC103837601 (bra)  LOC103849550 (bra)  LOC103871379 (bra)  LOC103874040 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_564559.1)
nucl 10  (predict for NP_849789.1)
nucl 10  (predict for NP_973998.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564559.1)
other 8  (predict for NP_849789.1)
other 8  (predict for NP_973998.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT1G25682 coiled-coil protein (DUF572) [detail] 839146
6.7 AT4G25210 DNA-binding storekeeper protein-related transcriptional regulator [detail] 828624
6.1 EML1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [detail] 820389
5.3 BPM4 BTB-POZ and MATH domain 4 [detail] 821170
Coexpressed
gene list		 [Coexpressed gene list for TRB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261637_at
261637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261637_at
261637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261637_at
261637_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841418      
Refseq ID (protein) NP_564559.1 
NP_849789.1 
NP_973998.1 


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