[←][→] ath   AT1G09760 Gene
functional annotation
Function   U2 small nuclear ribonucleoprotein A  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IDA  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO CC
GO:0015030 [list] [network] Cajal body  (16 genes)  IDA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_172447.1 
BLAST NP_172447.1 
Orthologous [Ortholog page] LOC4328823 (osa)  LOC25495091 (mtr)  LOC100264276 (vvi)  LOC100273115 (zma)  LOC100779162 (gma)  LOC100803110 (gma)  LOC101248760 (sly)  LOC103836312 (bra)  LOC103843334 (bra)  LOC103871750 (bra) 
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  chlo 1,  plas 1  (predict for NP_172447.1)
Subcellular
localization
TargetP
other 7  (predict for NP_172447.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03010 Ribosome 3
ath03040 Spliceosome 2
ath03013 RNA transport 2
Genes directly connected with U2A' on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 EIF3K eukaryotic translation initiation factor 3K [detail] 829461
6.7 AT5G06360 Ribosomal protein S8e family protein [detail] 830524
6.4 AT5G27470 seryl-tRNA synthetase / serine-tRNA ligase [detail] 832806
5.8 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 830268
Coexpressed
gene list		 [Coexpressed gene list for U2A']
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264678_at
264678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264678_at
264678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264678_at
264678_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837505      
Refseq ID (protein) NP_172447.1 


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