[←][→] ath   AT1G09770 Gene
functional annotation
Function   cell division cycle 5  
GO BP
GO:0009870 [list] [network] defense response signaling pathway, resistance gene-dependent  (15 genes)  IMP  
GO:0010204 [list] [network] defense response signaling pathway, resistance gene-independent  (19 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO:0045087 [list] [network] innate immune response  (322 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0007049 [list] [network] cell cycle  (516 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_172448.1 
BLAST NP_172448.1 
Orthologous [Ortholog page] LOC541962 (zma)  LOC4335542 (osa)  LOC7487702 (ppo)  LOC11429105 (mtr)  LOC25499707 (mtr)  cdc5 (sly)  LOC100243262 (vvi)  LOC100790369 (gma)  LOC100801352 (gma)  LOC103836311 (bra)  LOC103871749 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_172448.1)
Subcellular
localization
TargetP
other 9  (predict for NP_172448.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
Genes directly connected with CDC5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.9 AT2G02160 CCCH-type zinc finger family protein [detail] 814747
11.5 TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [detail] 832372
11.4 SKIP chromatin protein family [detail] 844055
11.3 EMB3011 RNA helicase family protein [detail] 831141
11.1 DOT2 SART-1 family [detail] 831541
9.1 AT4G01000 Ubiquitin-like superfamily protein [detail] 826414
8.6 CHR11 chromatin-remodeling protein 11 [detail] 819814
7.4 SMP1 Pre-mRNA splicing Prp18-interacting factor [detail] 842877
7.3 AT1G65280 DNAJ heat shock N-terminal domain-containing protein [detail] 842835
7.2 PPI1 proton pump interactor 1 [detail] 828859
6.3 AT1G71080 RNA polymerase II transcription elongation factor [detail] 843448
Coexpressed
gene list		 [Coexpressed gene list for CDC5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264709_at
264709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264709_at
264709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264709_at
264709_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837506      
Refseq ID (protein) NP_172448.1 


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