[←][→] ath   AT1G17730 Gene
functional annotation
Function   vacuolar protein sorting 46.1  
GO BP
GO:0000578 [list] [network] embryonic axis specification  (14 genes)  IGI  
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway  (18 genes)  IBA IGI  
GO:0045324 [list] [network] late endosome to vacuole transport  (27 genes)  IBA  
GO:0006914 [list] [network] autophagy  (55 genes)  IEA  
GO:0090351 [list] [network] seedling development  (115 genes)  IGI  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IGI  
GO:0015031 [list] [network] protein transport  (724 genes)  IBA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  IBA  
GO:0005771 [list] [network] multivesicular body  (20 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_173215.1 
BLAST NP_173215.1 
Orthologous [Ortholog page] LOC542116 (zma)  VPS46.2 (ath)  LOC4341638 (osa)  LOC7478182 (ppo)  LOC11433436 (mtr)  LOC100256723 (vvi)  LOC100792384 (gma)  LOC100795747 (gma)  LOC101247200 (sly)  LOC101260829 (sly)  LOC103830769 (bra)  LOC103831794 (bra) 
Subcellular
localization
wolf
nucl 6,  mito 3,  cyto_nucl 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_173215.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_173215.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with VPS46.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 UBC9 ubiquitin conjugating enzyme 9 [detail] 828909
7.5 VPS46.2 SNF7 family protein [detail] 843634
6.7 VPS37-1 Modifier of rudimentary (Mod(r)) protein [detail] 824478
6.5 MMZ1 MMS ZWEI homologue 1 [detail] 838935
5.9 AUG1 HAUS augmin-like complex subunit [detail] 818733
5.5 VPS20.2 vacuolar protein sorting-associated protein 20.2 [detail] 830785
5.0 AT4G25680 PPPDE putative thiol peptidase family protein [detail] 828673
Coexpressed
gene list		 [Coexpressed gene list for VPS46.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259402_at
259402_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259402_at
259402_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259402_at
259402_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838349      
Refseq ID (protein) NP_173215.1 


The preparation time of this page was 0.3 [sec].