[←][→] ath   AT1G73030 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0000578 [list] [network] embryonic axis specification  (14 genes)  IGI  
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway  (18 genes)  IBA IGI  
GO:0045324 [list] [network] late endosome to vacuole transport  (27 genes)  IBA  
GO:0090351 [list] [network] seedling development  (115 genes)  IGI  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IGI  
GO:0015031 [list] [network] protein transport  (724 genes)  IBA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  IBA  
GO:0005771 [list] [network] multivesicular body  (20 genes)  IBA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_565053.1 
BLAST NP_565053.1 
Orthologous [Ortholog page] LOC542116 (zma)  VPS46.1 (ath)  LOC4341638 (osa)  LOC7478182 (ppo)  LOC11433436 (mtr)  LOC100256723 (vvi)  LOC100792384 (gma)  LOC100795747 (gma)  LOC101247200 (sly)  LOC101260829 (sly)  LOC103830769 (bra)  LOC103831794 (bra) 
Subcellular
localization
wolf
nucl 5,  mito 4,  chlo 1  (predict for NP_565053.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565053.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with VPS46.2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 AT5G53310 myosin heavy chain-like protein [detail] 835412
7.6 BIGYIN Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824876
7.5 VPS46.1 vacuolar protein sorting 46.1 [detail] 838349
6.2 AT1G19310 RING/U-box superfamily protein [detail] 838513
6.1 AT2G19180 hypothetical protein [detail] 816435
5.6 AT5G01750 LURP-one-like protein (DUF567) [detail] 831684
Coexpressed
gene list		 [Coexpressed gene list for VPS46.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262367_at
262367_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262367_at
262367_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262367_at
262367_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843634      
Refseq ID (protein) NP_565053.1 


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