[←][→] ath   AT1G02080 Gene
functional annotation
Function   transcription regulator  
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001184889.1  NP_001321578.1  NP_171710.4 
BLAST NP_001184889.1  NP_001321578.1  NP_171710.4 
Orthologous [Ortholog page] LOC4331296 (osa)  LOC9272729 (osa)  LOC11429926 (mtr)  LOC100256945 (vvi)  LOC100261590 (vvi)  LOC100383837 (zma)  LOC100502409 (zma)  LOC100783935 (gma)  LOC100803794 (gma)  LOC100853179 (vvi)  LOC101267935 (sly)  LOC103843826 (bra)  LOC103850259 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001184889.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001321578.1)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for NP_171710.4)
Subcellular
localization
TargetP
other 6  (predict for NP_001184889.1)
other 6  (predict for NP_001321578.1)
chlo 5,  other 5  (predict for NP_171710.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G02080 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
16.3 UPL2 ubiquitin-protein ligase 2 [detail] 843368
16.2 TOR target of rapamycin [detail] 841427
14.6 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein [detail] 816303
14.1 CCT RNA polymerase II transcription mediator [detail] 827954
11.6 AT2G26780 ARM repeat superfamily protein [detail] 817219
11.1 GCT RNA polymerase II transcription mediator [detail] 841978
11.0 GSL10 glucan synthase-like 10 [detail] 819903
10.5 MOR1 ARM repeat superfamily protein [detail] 818131
9.4 AT1G23230 mediator of RNA polymerase II transcription subunit [detail] 838932
9.2 AT3G04490 exportin-4 protein [detail] 819605
9.1 EMB2773 PHD finger family protein [detail] 831407
8.9 RST1 ARM repeat superfamily protein [detail] 822389
8.9 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 831488
8.8 NRB4 mediator of RNA polymerase II transcription subunit 15a-like protein [detail] 838147
8.7 AT1G27430 GYF domain-containing protein [detail] 839633
8.3 AT5G06120 ARM repeat superfamily protein [detail] 830499
8.3 CLASP CLIP-associated protein [detail] 816539
7.8 SLOMO F-box family protein [detail] 829457
7.3 EMB1135 RING/FYVE/PHD zinc finger superfamily protein [detail] 844273
7.2 XRN4 exoribonuclease 4 [detail] 841891
7.2 TPR2 TOPLESS-related 2 [detail] 820936
Coexpressed
gene list		 [Coexpressed gene list for AT1G02080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264168_at
264168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264168_at
264168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264168_at
264168_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839244      
Refseq ID (protein) NP_001184889.1 
NP_001321578.1 
NP_171710.4 


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