[←][→] ath   AT1G04400 Gene
functional annotation
Function   cryptochrome 2  
GO BP
GO:0010617 [list] [network] circadian regulation of calcium ion oscillation  (3 genes)  IMP  
GO:0072387 [list] [network] flavin adenine dinucleotide metabolic process  (6 genes)  IMP  
GO:1902347 [list] [network] response to strigolactone  (7 genes)  IMP  
GO:0010244 [list] [network] response to low fluence blue light stimulus by blue low-fluence system  (9 genes)  IEP IMP  
GO:2000379 [list] [network] positive regulation of reactive oxygen species metabolic process  (11 genes)  IDA  
GO:0048574 [list] [network] long-day photoperiodism, flowering  (16 genes)  IMP  
GO:1901371 [list] [network] regulation of leaf morphogenesis  (20 genes)  IMP  
GO:0009785 [list] [network] blue light signaling pathway  (21 genes)  IGI  
GO:0009638 [list] [network] phototropism  (24 genes)  IGI IMP  
GO:0018298 [list] [network] protein-chromophore linkage  (38 genes)  IEA  
GO:0009911 [list] [network] positive regulation of flower development  (40 genes)  IMP  
GO:0051607 [list] [network] defense response to virus  (44 genes)  IMP  
GO:0009646 [list] [network] response to absence of light  (45 genes)  IEP  
GO:0006338 [list] [network] chromatin remodeling  (51 genes)  IMP  
GO:0010075 [list] [network] regulation of meristem growth  (54 genes)  IGI  
GO:0042752 [list] [network] regulation of circadian rhythm  (57 genes)  IMP  
GO:0010118 [list] [network] stomatal movement  (59 genes)  IGI  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IDA  
GO:0009637 [list] [network] response to blue light  (98 genes)  IDA IEP IMP  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IEP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IDA  
GO:0046777 [list] [network] protein autophosphorylation  (173 genes)  IDA  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IGI  
GO:0009416 [list] [network] response to light stimulus  (700 genes)  IEP IMP  
GO CC
GO:0016605 [list] [network] PML body  (5 genes)  IEA  
GO:0016604 [list] [network] nuclear body  (115 genes)  IDA IMP  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0009882 [list] [network] blue light photoreceptor activity  (5 genes)  ISS  
GO:0071949 [list] [network] FAD binding  (68 genes)  IDA  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
GO:0016301 [list] [network] kinase activity  (1362 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_171935.1  NP_849588.1 
BLAST NP_171935.1  NP_849588.1 
Orthologous [Ortholog page] CRY2 (sly)  LOC9270575 (osa)  LOC11418875 (mtr)  LOC25484452 (mtr)  LOC100233234 (gma)  LOC100247664 (vvi)  LOC100277533 (zma)  LOC100808627 (gma)  CRY2B (gma)  LOC103836576 (bra)  LOC103844260 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_171935.1)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_849588.1)
Subcellular
localization
TargetP
other 7  (predict for NP_171935.1)
other 7  (predict for NP_849588.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath04712 Circadian rhythm - plant 2
Genes directly connected with CRY2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT2G46550 transmembrane protein [detail] 819267
5.5 TPS11 trehalose phosphatase/synthase 11 [detail] 816385
5.5 CRY1 cryptochrome 1 [detail] 826470
Coexpressed
gene list		 [Coexpressed gene list for CRY2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263669_at
263669_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263669_at
263669_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263669_at
263669_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839529      
Refseq ID (protein) NP_171935.1 
NP_849588.1 


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