| functional annotation |
| Function |
RAD3-like DNA-binding helicase protein |
|
| GO BP |
|
GO:0000717 [list] [network] nucleotide-excision repair, DNA duplex unwinding
|
(1 genes)
|
IBA
|
 |
|
GO:0000019 [list] [network] regulation of mitotic recombination
|
(2 genes)
|
IBA
|
|
|
GO:0045951 [list] [network] positive regulation of mitotic recombination
|
(2 genes)
|
IBA
|
|
|
GO:0033683 [list] [network] nucleotide-excision repair, DNA incision
|
(7 genes)
|
IBA
|
|
|
GO:0006366 [list] [network] transcription by RNA polymerase II
|
(57 genes)
|
IBA
|
|
|
GO:0009411 [list] [network] response to UV
|
(120 genes)
|
IBA
IMP
|
|
|
GO:0009408 [list] [network] response to heat
|
(229 genes)
|
IMP
|
|
|
GO:0006281 [list] [network] DNA repair
|
(295 genes)
|
IMP
|
|
|
GO:0006979 [list] [network] response to oxidative stress
|
(442 genes)
|
IBA
|
|
|
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated
|
(495 genes)
|
IBA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity
|
(26 genes)
|
IBA
|
|
|
GO:0003678 [list] [network] DNA helicase activity
|
(34 genes)
|
IEA
|
|
|
GO:0003684 [list] [network] damaged DNA binding
|
(40 genes)
|
IBA
|
|
|
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding
|
(81 genes)
|
IEA
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
ath03022 [list] [network] Basal transcription factors (55 genes) |
 |
| ath03420 [list] [network] Nucleotide excision repair (69 genes) |
|
| Protein |
NP_171818.1
NP_849584.1
|
| BLAST |
NP_171818.1
NP_849584.1
|
| Orthologous |
[Ortholog page]
LOC4337788 (osa)
LOC7480701 (ppo)
LOC25487506 (mtr)
LOC100240869 (vvi)
LOC100285960 (zma)
LOC100801650 (gma)
LOC100806384 (gma)
LOC101255497 (sly)
LOC103836626 (bra)
|
Subcellular
localization
wolf |
|
cyto 3,
E.R. 2,
E.R._vacu 2,
chlo 1,
nucl 1,
cyto_pero 1
|
(predict for NP_171818.1)
|
|
cyto 3,
E.R. 2,
E.R._vacu 2,
chlo 1,
nucl 1,
cyto_pero 1
|
(predict for NP_849584.1)
|
|
Subcellular
localization
TargetP |
|
other 7
|
(predict for NP_171818.1)
|
|
other 7
|
(predict for NP_849584.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with UVH6 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 6.0 |
AT1G63490 |
transcription factor jumonji (jmjC) domain-containing protein |
[detail] |
842655 |
| 5.7 |
NTMC2T5.1 |
N-terminal-transmembrane-C2 domain type 5.1 |
[detail] |
841448 |
| 5.6 |
AT1G27900 |
RNA helicase family protein |
[detail] |
839683 |
| 5.0 |
POP4 |
ribonuclease P family protein |
[detail] |
818920 |
| 4.8 |
HDA9 |
histone deacetylase 9 |
[detail] |
823594 |
| 4.7 |
HAG1 |
histone acetyltransferase of the GNAT family 1 |
[detail] |
824626 |
|
Coexpressed
gene list |
[Coexpressed gene list for UVH6]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
264356_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
264356_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
264356_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G03190 Gene
