[←][→] ath   AT1G52240 Gene
functional annotation
Function   rop guanine nucleotide exchange factor-like protein  
GO BP
GO:0080147 [list] [network] root hair cell development  (89 genes)  IMP  
GO:0007017 [list] [network] microtubule-based process  (183 genes)  IEA  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO CC
GO:0030286 [list] [network] dynein complex  (6 genes)  IEA  
GO:0005874 [list] [network] microtubule  (186 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA IEA  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  ISS  
GO:0003774 [list] [network] motor activity  (78 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_175634.6 
BLAST NP_175634.6 
Orthologous [Ortholog page] KPP (sly)  ROPGEF8 (ath)  ROPGEF9 (ath)  ROPGEF12 (ath)  LOC4325510 (osa)  LOC4328986 (osa)  LOC4339594 (osa)  LOC7470557 (ppo)  LOC7478400 (ppo)  LOC11432219 (mtr)  LOC11442005 (mtr)  LOC25491404 (mtr)  LOC100191433 (zma)  LOC100216854 (zma)  LOC100260990 (vvi)  LOC100261758 (vvi)  LOC100281770 (zma)  LOC100777496 (gma)  LOC100778231 (gma)  LOC100781787 (gma)  LOC100787455 (gma)  LOC101243725 (sly)  LOC101248400 (sly)  LOC101251652 (sly)  LOC101268846 (sly)  LOC103626931 (zma)  LOC103828612 (bra)  LOC103830404 (bra)  LOC103838019 (bra)  LOC103860246 (bra)  LOC103868516 (bra)  LOC103871225 (bra)  LOC112998793 (gma) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 2  (predict for NP_175634.6)
Subcellular
localization
TargetP
other 8  (predict for NP_175634.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 9
Genes directly connected with ROPGEF11 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT1G05207 [detail] 28716268
3.9 AT2G05160 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 815064
3.5 LHCB2.2 photosystem II light harvesting complex protein 2.2 [detail] 815055
Coexpressed
gene list		 [Coexpressed gene list for ROPGEF11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259836_at
259836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259836_at
259836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259836_at
259836_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841654      
Refseq ID (protein) NP_175634.6 


The preparation time of this page was 0.4 [sec].