[←][→] ath   AT1G55460 Gene
functional annotation
Function   DNA/RNA-binding protein Kin17, conserved region  
GO BP
GO:0035874 [list] [network] cellular response to copper ion starvation  (2 genes)  IMP  
GO:0006260 [list] [network] DNA replication  (120 genes)  IBA  
GO:0048638 [list] [network] regulation of developmental growth  (156 genes)  IMP  
GO:0006974 [list] [network] cellular response to DNA damage stimulus  (329 genes)  IBA  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_564690.1 
BLAST NP_564690.1 
Orthologous [Ortholog page] AT5G51795 (ath)  LOC11436625 (mtr)  LOC100256009 (vvi)  LOC100273614 (zma)  LOC100283771 (zma)  LOC100784271 (gma)  LOC100785931 (gma)  LOC101263612 (sly)  LOC103832586 (bra)  LOC112936102 (osa) 
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_564690.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564690.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G55460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 AT3G18790 pre-mRNA-splicing factor ISY1-like protein [detail] 821412
8.6 AT3G47120 RNA recognition motif (RRM)-containing protein [detail] 823865
8.4 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [detail] 822039
8.4 VFB2 VIER F-box protein 2 [detail] 824170
7.3 MOS2 D111/G-patch domain-containing protein [detail] 840246
7.3 AT4G35540 POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 [detail] 829706
7.2 AT5G19900 PRLI-interacting factor [detail] 832112
7.2 NFS1 nitrogen fixation S (NIFS)-like 1 [detail] 836701
6.1 AT5G03990 FK506-binding-like protein [detail] 830278
Coexpressed
gene list		 [Coexpressed gene list for AT1G55460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265079_at
265079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265079_at
265079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265079_at
265079_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841993      
Refseq ID (protein) NP_564690.1 


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