[←][→] ath   AT1G55870 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H-like superfamily protein  
GO BP
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (19 genes)  IEA  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001319244.1  NP_001322686.1  NP_001322687.1  NP_175983.5 
BLAST NP_001319244.1  NP_001322686.1  NP_001322687.1  NP_175983.5 
Orthologous [Ortholog page] LOC7487549 (ppo)  LOC9268289 (osa)  LOC25490728 (mtr)  LOC100258377 (vvi)  LOC100383372 (zma)  LOC100784997 (gma)  LOC100808217 (gma)  LOC101250035 (sly)  LOC103871015 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  plas 1  (predict for NP_001319244.1)
nucl 5,  cyto 2,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_001322686.1)
nucl 4,  cyto 4,  plas 1  (predict for NP_001322687.1)
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for NP_175983.5)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for NP_001319244.1)
other 9  (predict for NP_001322686.1)
other 9,  mito 3  (predict for NP_001322687.1)
mito 6  (predict for NP_175983.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03013 RNA transport 2
ath03010 Ribosome 2
Genes directly connected with AHG2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT2G04740 ankyrin repeat family protein [detail] 815017
6.1 AT3G09720 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820129
6.1 EIF3G2 eukaryotic translation initiation factor 3G2 [detail] 830487
5.9 AT4G24880 snurportin-1 protein [detail] 828590
5.7 AT2G40630 Uncharacterized conserved protein (UCP030365) [detail] 818658
4.4 AT3G45880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 823731
Coexpressed
gene list		 [Coexpressed gene list for AHG2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260593_at
260593_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260593_at
260593_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260593_at
260593_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842037      
Refseq ID (protein) NP_001319244.1 
NP_001322686.1 
NP_001322687.1 
NP_175983.5 


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