[←][→] ath   AT1G63800 Gene
functional annotation
Function   ubiquitin-conjugating enzyme 5  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA IDA TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (37 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001321725.1  NP_564817.2 
BLAST NP_001321725.1  NP_564817.2 
Orthologous [Ortholog page] UBC4 (gma)  UBC4 (ath)  LOC4348755 (osa)  LOC7457348 (ppo)  LOC7457718 (ppo)  LOC7472757 (ppo)  LOC7496982 (ppo)  LOC11407971 (mtr)  LOC25500869 (mtr)  LOC25502069 (mtr)  LOC100194405 (zma)  LOC100244806 (vvi)  LOC100250088 (vvi)  LOC100253472 (vvi)  LOC100527526 (gma)  LOC100527756 (gma)  LOC100790685 (gma)  LOC100791133 (gma)  LOC100804969 (gma)  LOC100805356 (gma)  LOC100812138 (gma)  LOC100857003 (zma)  LOC101202716 (zma)  LOC101253514 (sly)  LOC101254242 (sly)  LOC101261295 (sly)  LOC101265863 (sly)  LOC103850216 (bra)  LOC103864075 (bra)  LOC115565779 (zma) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  extr 1,  golg 1  (predict for NP_001321725.1)
nucl 6,  cyto 4  (predict for NP_564817.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001321725.1)
other 7  (predict for NP_564817.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
ath04120 Ubiquitin mediated proteolysis 3
ath00564 Glycerophospholipid metabolism 2
ath00592 alpha-Linolenic acid metabolism 2
Genes directly connected with UBC5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 ATG8F Ubiquitin-like superfamily protein [detail] 827351
6.6 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein [detail] 815012
6.3 UBC4 ubiquitin conjugating enzyme 4 [detail] 834136
Coexpressed
gene list		 [Coexpressed gene list for UBC5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260317_at
260317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260317_at
260317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260317_at
260317_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842683      
Refseq ID (protein) NP_001321725.1 
NP_564817.2 


The preparation time of this page was 2.2 [sec].