[←][→] ath   AT1G80560 Gene
functional annotation
Function   isopropylmalate dehydrogenase 2  
GO BP
GO:0009098 [list] [network] leucine biosynthetic process  (16 genes)  IBA IDA IEA IGI IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  ISS  
GO MF
GO:0003862 [list] [network] 3-isopropylmalate dehydrogenase activity  (4 genes)  IBA IDA IGI IMP  
GO:0070403 [list] [network] NAD+ binding  (7 genes)  IDA  
GO:0000287 [list] [network] magnesium ion binding  (115 genes)  IEA  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IDA  
KEGG ath00290 [list] [network] Valine, leucine and isoleucine biosynthesis (22 genes)
ath00660 [list] [network] C5-Branched dibasic acid metabolism (7 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_178171.1 
BLAST NP_178171.1 
Orthologous [Ortholog page] IMD1 (ath)  IMD3 (ath)  LOC4333613 (osa)  LOC7470567 (ppo)  LOC11433087 (mtr)  LOC100259968 (vvi)  LOC100283376 (zma)  LOC100284589 (zma)  LOC100793433 (gma)  LOC100807689 (gma)  LOC100810468 (gma)  LOC101247914 (sly)  LOC103832473 (bra)  LOC103850918 (bra)  LOC103853240 (bra) 
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_178171.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_178171.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath01210 2-Oxocarboxylic acid metabolism 5
ath00260 Glycine, serine and threonine metabolism 3
ath00261 Monobactam biosynthesis 3
ath00300 Lysine biosynthesis 3
Genes directly connected with IMD2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 AT1G14810 semialdehyde dehydrogenase family protein [detail] 838046
6.6 AK-LYS1 aspartate kinase 1 [detail] 831169
6.2 UPP uracil phosphoribosyltransferase [detail] 824557
6.0 NAGS2 N-acetyl-l-glutamate synthase 2 [detail] 829921
5.7 AT1G16445 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 838215
5.6 ATXR2 histone-lysine N-methyltransferase ATXR2 [detail] 821736
4.6 CRL2 NAD(P)-binding Rossmann-fold superfamily protein [detail] 817926
4.2 AT4G19410 Pectinacetylesterase family protein [detail] 827682
Coexpressed
gene list		 [Coexpressed gene list for IMD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260285_at
260285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260285_at
260285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260285_at
260285_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844395      
Refseq ID (protein) NP_178171.1 


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