[←][→] ath   AT1G05900 Gene
functional annotation
Function   endonuclease III 2  
GO BP
GO:0006296 [list] [network] nucleotide-excision repair, DNA incision, 5'-to lesion  (3 genes)  IBA  
GO:0006285 [list] [network] base-excision repair, AP site formation  (5 genes)  IBA  
GO:0006284 [list] [network] base-excision repair  (25 genes)  IDA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (44 genes)  IBA IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0000703 [list] [network] oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity  (2 genes)  IBA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (13 genes)  IBA  
GO:0019104 [list] [network] DNA N-glycosylase activity  (22 genes)  IDA  
KEGG ath03410 [list] [network] Base excision repair (43 genes)
Protein NP_563752.1  NP_973767.1 
BLAST NP_563752.1  NP_973767.1 
Orthologous [Ortholog page] ATNTH1 (ath)  LOC7469594 (ppo)  LOC9268162 (osa)  LOC11434742 (mtr)  LOC25492651 (mtr)  LOC100268015 (vvi)  LOC100805799 (gma)  LOC100818398 (gma)  LOC101248783 (sly)  LOC101262253 (sly)  LOC103640763 (zma)  LOC103843583 (bra)  LOC103857374 (bra) 
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto_mito 1,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for NP_563752.1)
chlo 5,  mito 3,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_973767.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_563752.1)
chlo 7  (predict for NP_973767.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with NTH2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 ATNTH1 DNA glycosylase superfamily protein [detail] 817703
5.8 AT3G21390 Mitochondrial substrate carrier family protein [detail] 821693
5.5 AT5G52030 TraB family protein [detail] 835278
5.3 AT5G22820 ARM repeat superfamily protein [detail] 832345
5.2 MAP1B methionine aminopeptidase 1C [detail] 822165
Coexpressed
gene list		 [Coexpressed gene list for NTH2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261255_at
261255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261255_at
261255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261255_at
261255_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837100      
Refseq ID (protein) NP_563752.1 
NP_973767.1 


The preparation time of this page was 0.2 [sec].