[←][→] ath   AT1G06790 Gene
functional annotation
Function   RNA polymerase Rpb7 N-terminal domain-containing protein  
GO BP
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP  
GO:0016070 [list] [network] RNA metabolic process  (1305 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_172164.1  NP_973776.1 
BLAST NP_172164.1  NP_973776.1 
Orthologous [Ortholog page] LOC4343220 (osa)  LOC7471998 (ppo)  LOC11417037 (mtr)  LOC100261445 (vvi)  LOC100263195 (vvi)  LOC100263218 (vvi)  LOC100281221 (zma)  LOC100800770 (gma)  LOC100808954 (gma)  LOC101258274 (sly)  LOC103836467 (bra)  LOC103843493 (bra)  LOC104879744 (vvi) 
Subcellular
localization
wolf
cyto 6,  extr 1,  pero 1,  chlo 1,  nucl 1  (predict for NP_172164.1)
cyto 6,  pero 2,  chlo 1,  extr 1  (predict for NP_973776.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_172164.1)
other 8,  scret 3  (predict for NP_973776.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03018 RNA degradation 2
Genes directly connected with AT1G06790 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 RPSAb 40s ribosomal protein SA B [detail] 819637
5.7 RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835833
5.6 AT1G60080 3'-5'-exoribonuclease family protein [detail] 842303
4.8 AT5G66000 hypothetical protein [detail] 836730
Coexpressed
gene list		 [Coexpressed gene list for AT1G06790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260822_at
260822_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260822_at
260822_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260822_at
260822_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837190      
Refseq ID (protein) NP_172164.1 
NP_973776.1 


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