[←][→] ath   At1g09790 Gene
functional annotation
Function   COBRA-like protein 6 precursor    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010215 [list] [network] cellulose microfibril organization  (17 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO:0016020 [list] [network] membrane  (3629 genes)  TAS  
GO MF
KEGG
Protein NP_001322459.1  NP_172450.2 
BLAST NP_001322459.1  NP_172450.2 
Orthologous [Ortholog page] LOC543124 (tae)  COBL1 (ath)  COBL2 (ath)  COB (ath)  LOC4333115 (osa)  LOC4334147 (osa)  LOC4336536 (osa)  LOC4338658 (osa)  LOC4343844 (osa)  LOC7453627 (ppo)  LOC7457595 (ppo)  LOC7480590 (ppo)  LOC7484714 (ppo)  LOC11411610 (mtr)  LOC18098280 (ppo)  LOC18107335 (ppo)  LOC18107336 (ppo)  LOC25487967 (mtr)  LOC25495418 (mtr)  LOC25495419 (mtr)  LOC25497596 (mtr)  LOC100305816 (gma)  LOC100782876 (gma)  LOC100783820 (gma)  LOC100797383 (gma)  LOC100804568 (gma)  LOC100809729 (gma)  LOC100811581 (gma)  LOC100815779 (gma)  LOC100815926 (gma)  COBRA-like (sly)  LOC101252834 (sly)  LOC101253637 (sly)  LOC101259823 (sly)  LOC101260090 (sly)  LOC101260415 (sly)  LOC103836309 (bra)  LOC103837359 (bra)  LOC103849801 (bra)  LOC103860552 (bra)  LOC103870928 (bra)  LOC103871751 (bra)  LOC103875066 (bra)  LOC112940047 (sly)  LOC112997606 (gma)  LOC123049694 (tae)  LOC123052146 (tae)  LOC123071835 (tae)  LOC123080161 (tae)  LOC123086798 (tae)  LOC123091177 (tae)  LOC123096176 (tae)  LOC123113352 (tae)  LOC123128916 (tae)  LOC123146071 (tae)  LOC123185784 (tae)  LOC123188006 (tae)  LOC123398589 (hvu)  LOC123403280 (hvu)  LOC123425406 (hvu)  LOC123430594 (hvu)  LOC123447814 (hvu)  LOC123452279 (hvu) 
Subcellular
localization
wolf
plas 5,  vacu 3,  golg_plas 3,  cyto_plas 3  (predict for NP_001322459.1)
plas 4,  golg_plas 4,  vacu 3,  golg 2  (predict for NP_172450.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_001322459.1)
scret 9  (predict for NP_172450.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 4
ath00500 Starch and sucrose metabolism 2
Genes directly connected with COBL6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 820473
5.3 SWEET8 Nodulin MtN3 family protein [detail] 834024
5.2 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 830796
Coexpressed
gene list		 [Coexpressed gene list for COBL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264710_at
264710_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264710_at
264710_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264710_at
264710_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837508      
Refseq ID (protein) NP_001322459.1 
NP_172450.2 


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